Sequence of DPV Influenza A virus

Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) nucleocapsid protein (NP) gene, complete cds.

ACC No: AF144303

Dated: 2000-03-08 | Length: 1565 | CRC: -1171099073

                
ID   AF144303   standard; genomic RNA; VRL; 1565 BP.
XX
AC   AF144303;
XX
SV   AF144303.1
XX
DT   01-SEP-1999 (Rel. 60, Created)
DT   08-MAR-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) nucleocapsid protein (NP)
DE   gene, complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/Goose/Guangdong/1/96(H5N1))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1565
RX   DOI; 10.1006/viro.1999.9820.
RX   PUBMED; 10484749.
RA   Xu X., Subbarao, Cox N.J., Guo Y.;
RT   "Genetic characterization of the pathogenic influenza
RT   A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene
RT   to those of H5N1 viruses from the 1997 outbreaks in Hong Kong";
RL   Virology 261(1):15-19(1999).
XX
RN   [2]
RP   1-1565
RA   Xu X., Subbarao K., Cox N.J., Guo Y.;
RT   ;
RL   Submitted (20-APR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Influenza Branch, Center for Diseases Control and Prevention, 1600 Clifton
RL   Road, Atlanta, GA 30333, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1565
FT                   /db_xref="taxon:93838"
FT                   /mol_type="genomic RNA"
FT                   /organism="Influenza A virus
FT                   (A/Goose/Guangdong/1/96(H5N1))"
FT                   /strain="A/Goose/Guangdong/1/96(H5N1)"
FT   CDS             46. .1542
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9Q0U8"
FT                   /db_xref="InterPro:IPR002141"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q0U8"
FT                   /gene="NP"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="AAD51925.1"
FT                   /translation="MASQGTKRSYEQMETGGERQNATEIRASVGRMVGGIGRFYIQMCT
FT                   ELKLSDYEGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGGPIYRRRDGKW
FT                   VRELILYDKEEIRRIWRQANNGEDATAGLTHMMIWHSNLNDATYQRTRALVRTGMDPRM
FT                   CSLMQGSTLPRRSGAAGAAVKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRIAYERM
FT                   CNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVY
FT                   GLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFED
FT                   LRVSSFIRGTRVAPRGQLSTRGVQIASNENMETMDSSTLELRSRYWAIRTRSGGNTNQQ
FT                   RASAGQISVQPTFSVQRNLPFERATIMAAFTGNTEGRTSDMRTEIIRMMESSRPEDVSF
FT                   QGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEYDN"
XX
SQ   Sequence 1565 BP; 498 A; 306 C; 426 G; 335 T; 0 other;

af144303 Length: 1565  08-MAR-2000  Type: N  Check: 8830  ..

       1  agcaaaagca gggtagataa tcactcactg agtgacatca acatcatggc
      51  gtctcagggc accaaacgat cttatgaaca gatggaaact ggtggagaac
     101  gccagaatgc tactgagatc agagcatctg ttggaagaat ggttggtgga
     151  attgggaggt tttatataca gatgtgcact gaactcaaac tcagcgacta
     201  tgaaggaagg ctgattcaga acagcataac aatagagaga atggttctct
     251  ctgcatttga tgaaaggagg aacaaatacc tggaagaaca tcccagtgcg
     301  gggaaggacc caaagaaaac tggaggtcca atctaccgaa gaagagacgg
     351  aaaatgggtg agagagctga ttctgtatga caaagaggag atcaggagaa
     401  tttggcgtca agcgaacaat ggagaagatg caactgctgg tctcactcac
     451  atgatgatct ggcattccaa tctaaatgat gccacatacc agagaacaag
     501  agctctcgtg cgtactggga tggaccctag aatgtgctct ctgatgcaag
     551  gatcaactct cccgaggaga tctggagctg ctggtgcggc agtaaaggga
     601  gtcggaacga tggtgatgga actaattcgg atgataaagc gagggattaa
     651  cgatcggaat ttctggagag gtgaaaatgg gcgaagaaca agaattgcat
     701  atgagagaat gtgcaacatc ctcaaaggga aattccaaac agcagcacaa
     751  agagcaatga tggatcaggt acgggaaagc agaaatcctg ggaatgctga
     801  gattgaagat ctcatatttc tggcacggtc tgcactcatc ctgagaggat
     851  cagtggccca caagtcctgc ttgcctgctt gtgtgtacgg gcttgccgtg
     901  gccagtggat atgactttga gagagaaggg tactctctgg tcgggattga
     951  tcctttccgt ctgctgcaaa acagccaggt ctttagtcta attagaccaa
    1001  atgagaatcc agcacataaa agtcaattgg tgtggatggc atgccattct
    1051  gcagcatttg aagatctgag agtctcaagc ttcatcagag ggacaagagt
    1101  ggccccaagg ggacaactat ctactagagg agttcaaatt gcttcaaatg
    1151  agaacatgga aacaatggac tccagcactc ttgaactgag aagcagatat
    1201  tgggctataa ggaccaggag tggaggaaac accaaccagc agagagcatc
    1251  tgcaggacaa atcagtgtgc agcctacttt ctcggtacag agaaatcttc
    1301  ccttcgaaag agcgaccatt atggcggcat tcacagggaa tacagagggc
    1351  agaacatctg acatgaggac tgaaatcata aggatgatgg aaagctccag
    1401  accagaagat gtgtctttcc aggggcgggg agtcttcgag ctctcggacg
    1451  aaaaggcaac gaacccgatc gtgccttcct ttgacatgag taatgaagga
    1501  tcttatttct tcggagacaa tgcagaggaa tatgacaatt gaagaaaaat
    1551  acccttgttt ctact