Sequence of DPV Influenza A virus

Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) hemagglutinin (HA) gene, complete cds.

ACC No: AF144305

Dated: 2005-04-15 | Length: 1760 | CRC: 1277601369

                
ID   AF144305   standard; genomic RNA; VRL; 1760 BP.
XX
AC   AF144305;
XX
SV   AF144305.1
XX
DT   01-SEP-1999 (Rel. 60, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Influenza A virus (A/Goose/Guangdong/1/96(H5N1)) hemagglutinin (HA) gene,
DE   complete cds.
XX
KW   .
XX
OS   Influenza A virus (A/Goose/Guangdong/1/96(H5N1))
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Influenzavirus A.
XX
RN   [1]
RP   1-1760
RX   DOI; 10.1006/viro.1999.9820.
RX   PUBMED; 10484749.
RA   Xu X., Subbarao, Cox N.J., Guo Y.;
RT   "Genetic characterization of the pathogenic influenza
RT   A/Goose/Guangdong/1/96 (H5N1) virus: similarity of its hemagglutinin gene
RT   to those of H5N1 viruses from the 1997 outbreaks in Hong Kong";
RL   Virology 261(1):15-19(1999).
XX
RN   [2]
RP   1-1760
RA   Xu X., Subbarao K., Cox N.J., Guo Y.;
RT   ;
RL   Submitted (20-APR-1999) to the EMBL/GenBank/DDBJ databases.
RL   Influenza Branch, Center for Diseases Control and Prevention, 1600 Clifton
RL   Road, Atlanta, GA 30333, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1760
FT                   /db_xref="taxon:93838"
FT                   /mol_type="genomic RNA"
FT                   /organism="Influenza A virus
FT                   (A/Goose/Guangdong/1/96(H5N1))"
FT                   /strain="A/Goose/Guangdong/1/96(H5N1)"
FT   CDS             22. .1728
FT                   /codon_start=1
FT                   /db_xref="GOA:Q9Q0U6"
FT                   /db_xref="HSSP:1JSM"
FT                   /db_xref="InterPro:IPR000149"
FT                   /db_xref="InterPro:IPR001364"
FT                   /db_xref="UniProtKB/TrEMBL:Q9Q0U6"
FT                   /gene="HA"
FT                   /product="hemagglutinin"
FT                   /protein_id="AAD51927.1"
FT                   /translation="MEKIVLLLAIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHA
FT                   QDILEKTHNGKLCDLNGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPAND
FT                   LCYPGDFNDYEELKHLLSRTNHFEKIQIIPKSSWSNHDASSGVSSACPYHGRSSFFRNV
FT                   VWLIKKNSAYPTIKRSYNNTNQEDLLVLWGIHHPNDAAEQTKLYQNPTTYISVGTSTLN
FT                   QRLVPEIATRPKVNGQSGRMEFFWTILKPNDAINFESNGNFIAPEYAYKIVKKGDSAIM
FT                   KSELEYGNCNTKCQTPMGAINSSMPFHNIHPLTIGECPKYVKSNRLVLATGLRNTPQRE
FT                   RRRKKRGLFGAIAGFIEGGWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVN
FT                   SIIDKMNTQFEAVGREFNNLERRIENLNKQMEDGFLDVWTYNAELLVLMENERTLDFHD
FT                   SNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVKNGTYDYPQYSEEARLNRE
FT                   EISGVKLESMGTYQILSIYSTVASSLALAIMVAGLSLWMCSNGSLQCRICI"
XX
SQ   Sequence 1760 BP; 605 A; 329 C; 405 G; 421 T; 0 other;

af144305 Length: 1760  15-APR-2005  Type: N  Check: 5093  ..

       1  gcaggggtat aatctgtcaa aatggagaaa atagtgcttc ttcttgcaat
      51  agtcagtctt gtcaaaagtg atcagatttg cattggttac catgcaaaca
     101  actcgacaga gcaggttgac acaataatgg aaaagaacgt tactgttaca
     151  catgcccaag acatactgga aaagacacac aatgggaagc tctgcgatct
     201  aaatggagtg aagcctctca ttttgagaga ttgtagtgta gctggatggc
     251  tcctcggaaa ccctatgtgt gacgaattca tcaatgtgcc ggaatggtct
     301  tacatagtgg agaaggccag tccagccaat gacctctgtt acccagggga
     351  tttcaacgac tatgaagaac tgaaacacct attgagcaga acaaaccatt
     401  ttgagaaaat tcagatcatc cccaaaagtt cttggtccaa tcatgatgcc
     451  tcatcagggg tgagctcagc atgtccatac catgggaggt cctccttttt
     501  cagaaatgtg gtatggctta tcaaaaagaa cagtgcatac ccaacaataa
     551  agaggagcta caataatacc aaccaagaag atcttttagt actgtggggg
     601  attcaccatc ctaatgatgc ggcagagcag acaaagctct atcaaaaccc
     651  aaccacttac atttccgttg gaacatcaac actgaaccag agattggttc
     701  cagaaatagc tactagaccc aaagtaaacg ggcaaagtgg aagaatggag
     751  ttcttctgga caattttaaa gccgaatgat gccatcaatt tcgagagtaa
     801  tggaaatttc attgctccag aatatgcata caaaattgtc aagaaagggg
     851  actcagcaat tatgaaaagt gaattggaat atggtaactg caacaccaag
     901  tgtcaaactc caatgggggc gataaactct agtatgccat tccacaacat
     951  acaccccctc accatcgggg aatgccccaa atatgtgaaa tcaaacagat
    1001  tagtccttgc gactggactc agaaataccc ctcagagaga gagaagaaga
    1051  aaaaagagag gactatttgg agctatagca ggttttatag agggaggatg
    1101  gcagggaatg gtagatggtt ggtatgggta ccaccatagc aatgagcagg
    1151  ggagtggata cgctgcagac aaagaatcca ctcaaaaggc aatagatgga
    1201  gtcaccaata aggtcaactc gatcattgac aaaatgaaca ctcagtttga
    1251  ggccgttgga agggaattta ataacttgga aaggaggata gagaatttaa
    1301  acaagcagat ggaagacgga ttcctagatg tctggactta taatgctgaa
    1351  cttctggttc tcatggaaaa tgagagaact ctagactttc atgactcaaa
    1401  tgtcaagaac ctttatgaca aggtccgact acagcttagg gataatgcaa
    1451  aggagctggg taatggttgt ttcgagttct atcacaaatg tgataatgaa
    1501  tgtatggaaa gtgtaaaaaa cggaacgtat gactacccgc agtattcaga
    1551  agaagcaaga ctaaacagag aggaaataag tggagtaaaa ttggaatcaa
    1601  tgggaactta ccaaatactg tcaatttatt caacagtggc gagttcccta
    1651  gcactggcaa tcatggtagc tggtctatct ttatggatgt gctccaatgg
    1701  atcgttacaa tgcagaattt gcatttaaat ttgtgagttc agattgtagt
    1751  taaaaacacc