Sequence of DPV Cucumber mosaic virus
Cucumber mosaic virus segment RNA2 2a protein and 2b protein genes, complete cds.
ACC No: AF150731
Dated: 1999-06-03 | Length: 3044 | CRC: -103957241
!!NA_SEQUENCE 1.0
ID AF150731 standard; RNA; VRL; 3044 BP.
XX
AC AF150731;
XX
SV AF150731.1
XX
DT 03-JUN-1999 (Rel. 59, Created)
DT 03-JUN-1999 (Rel. 59, Last updated, Version 1)
XX
DE Cucumber mosaic virus segment RNA2 2a protein and 2b protein genes,
DE complete cds.
XX
KW .
XX
OS cucumber mosaic virus (cucumber mosaic cucumovirus)
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
XX
RN [1]
RP 1-3044
RA Hellwald K.-H., Glenewinkel D.;
RT "A new genotype within cucumber mosaic virus subgroup I: Molecular
RT characterization of the polymerase encoding RNA2";
RL Unpublished.
XX
RN [2]
RP 1-3044
RA Hellwald K.-H., Glenewinkel D.;
RT ;
RL Submitted (12-MAY-1999) to the EMBL/GenBank/DDBJ databases.
RL Institute of Phytomedicine, University of Hohenheim, Otto Sander Str. 5,
RL Stuttgart 70599, Germany
XX
DR SPTREMBL; Q9WA71; Q9WA71.
DR SPTREMBL; Q9WA72; Q9WA72.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3044
FT /chromosome="segment RNA2"
FT /db_xref="taxon:12305"
FT /organism="cucumber mosaic virus"
FT /strain="MB-CMV"
FT CDS 76. .2652
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WA71"
FT /note="RNA polymerase homolog"
FT /product="2a protein"
FT /protein_id="AAD35092.1"
FT /translation="MAFPAPTFSLANLLNGSYGVDTPEEVERVRSEQREEAAAACRNYR
FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVEFVSYGAEDYLEKSDDELLIAFETMVKP
FT MRIGQLWCPEFDKCLFISSVAMARALLLAPRTSPRTMKCFEDLVAAIYTKSDFYYDDEC
FT ETDDVQIDISSRDVPGYSFEPWSRSSGFEPPPICEACDMIMYQCPCYDFNALKKSCTER
FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPDLNRATDRVDIN
FT LVQSICDSTLPTHNSYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN
FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKPVAERFFISYINGNSLASSN
FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP
FT ATITYHKKGITSQFSPLFTALVERFQRCLRGRIILPVGKISSLEMAGFDVKNKHCLEID
FT LSKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRT
FT GDAFTYFGNTIVTMAEFAWCYDTDQFEKLLFSGDDSLGFSILPPVGDPSKFTTLFNMEA
FT KVMEPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNDEFLFAHFMSFVD
FT RLKFLDRMSQSCIDQLSLFFELKYRKSGAEAALILGAFKKYTANFKSYKELYYSDRRQC
FT ELINSFNCVELRIERSISNKQRKKKDGIERRRNDKRRTPTGSYDGGEETKTKVSQEEST
FT GTRSQKSQREGAFKSQTIPLPTILSGRWFGTDRDVPPCEHGGIVQV"
FT CDS 2411. .2746
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9WA72"
FT /product="2b protein"
FT /protein_id="AAD35093.1"
FT /translation="MELNEGAMTNVELQLARMMEVKRQRRRSHKKNRRERGHKSPSERA
FT RSNLRLFRFLPFYQVDGSELIEMYHHASMVELSKSEAPCFTLPAEEDHDFDDTDWFAGN
FT EWAEGAF"
XX
SQ Sequence 3044 BP; 778 A; 671 C; 704 G; 891 T; 0 other;
AF150731 Length: 3044 December 21, 2001 14:53 Type: N Check: 3358 ..
1 gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaactc
51 caaactttta agtttccatt tttctatggc ttttcccgcc cctactttct
101 cactggccaa tcttttgaat ggcagttacg gtgtcgacac tcccgaggaa
151 gtagaacgcg tgcgatctga gcaacgcgaa gaggctgctg cggcctgtcg
201 taattacagg cccttacccg ctgtggatgt cagcgagagt gtcacagagg
251 atgcgcattc cctccgaact ccagacggag ctccctctga agaggtgtct
301 gttgagtttg tctcttatgg tgctgaagat taccttgaaa aatctgatga
351 tgagctcctt atcgcttttg agacgatggt caaacccatg cgtatcggtc
401 aactatggtg ccccgagttc gataaatgtt tatttatctc cagcgttgct
451 atggccagag ctttgctgct agcacctaga acatcccccc gaaccatgaa
501 gtgttttgaa gacctggtcg cggctattta cactaaatcc gatttctatt
551 acgatgatga gtgtgaaacc gacgacgttc agatagatat ctcgtctcgc
601 gatgtacccg gttattcttt cgaaccgtgg tcccgatcgt ctggatttga
651 accaccgcct atctgtgagg cgtgtgacat gatcatgtac cagtgcccat
701 gttatgattt taacgcttta aagaaatcat gcactgagag gacttttgct
751 gacgattatg ttattgaagg tttagatggt gttgttgaca atgcaacttt
801 gttgtcgaat ttaggcccgt ttttggtgcc tgtgaaatgt caatatgaga
851 aatgtccaac acctaccgtc gcgattcctc cggatttaaa tcgtgctact
901 gatcgtgttg atattaattt ggttcaatcc atttgtgact cgactctgcc
951 cactcacaat agctacgacg actcttttca tcaggtgttt gtcgaaagcg
1001 cggattattc tattgatctg gatcatgtta gacttcgaca gtctgatctt
1051 attgcgaaaa ttccagattc agggcatatg ataccggttt tgaataccgg
1101 gagcggtcac aagagagtag gtactacgaa ggaggtcctt acagcaatca
1151 agaaacgtaa tgctgacgtt ccagagctag gtgattccgt taatctgtct
1201 aggttgagta agcctgtggc tgagaggttt ttcatttcat atattaatgg
1251 caactctcta gcatccagca actttgttaa tgtcgttagt aacttccacg
1301 attacatgga gaaatggaag tcctcaggtc tttcgtatga cgatcttcca
1351 gatcttcatg ctgaaaatct gcaattttat gatcacatga taaaatctga
1401 tgtgaaacct gtagtgagcg acacactcaa cattgacaga ccggttccag
1451 ctactataac gtatcacaag aaaggtataa cctcccagtt ctcaccgtta
1501 ttcacagcgc tagtcgagcg cttccagaga tgccttcgag gacgtatcat
1551 tcttcctgtt ggaaagattt catcccttga gatggcggga ttcgatgtta
1601 agaataaaca ttgtctcgag attgatctgt ctaaatttga caagtctcag
1651 ggtgagttcc atttgatgat tcaggaacat attttgaatg gtctaggatg
1701 tccagctccg ataactaagt ggtggtgtga tttccatcga ttctcttaca
1751 ttagagaccg tagagctggt gttggtatgc ctatcagttt ccagagacga
1801 actggtgatg cattcactta ttttggtaac accatagtca cgatggctga
1851 atttgcatgg tgttacgaca ccgaccaatt cgaaaagctt ttattctcag
1901 gcgatgactc tctaggattt tcaatacttc cccctgttgg cgatccgagt
1951 aaattcacaa ctctcttcaa catggaagct aaggtgatgg aacctgcagt
2001 accatacatt tgttcgaagt tcttactctc tgacgagttc ggtaatactt
2051 tttccgttcc agatccattg cgtgagattc agcggttagg aacaaagaag
2101 atcccctatt ctgacaatga tgaattcctg tttgctcact tcatgagctt
2151 tgttgaccga ttgaagtttt tggaccgaat gtctcagtct tgcatcgatc
2201 aactctcact ctttttcgag ttgaagtaca ggaagtcggg ggctgaggct
2251 gctttaatac taggcgcctt taagaaatat accgctaatt tcaaatccta
2301 taaagaactc tactactcag atcgtcgtca gtgcgaattg atcaattcgt
2351 ttaattgcgt agagttaagg attgagcgtt cgatttccaa taagcaacga
2401 aagaagaaag atggaattga acgaaggcgc aatgacaaac gtcgaactcc
2451 aactggctcg tatgatggag gtgaagagac aaagacgaag gtctcacaag
2501 aagaatcgac gggaacgagg tcacaaaagt cccagcgaga gggcgcgttc
2551 aaatctcaga ctattccgct tcctaccatt ttatcaggta gatggttcgg
2601 aactgataga gatgtaccac catgcgagca tggtggaatt gtccaagtct
2651 gaggcccctt gttttacgtt accagcggaa gaagaccatg atttcgacga
2701 cacggattgg ttcgctggta atgaatgggc ggaaggtgcg ttttgaatct
2751 ccccttcctt ttctccctcc agtttctgag gcggagctga gttggcagta
2801 ttgctataaa ctgtctgaag tcactaaacg ctttgcggtg aacgggttgt
2851 ccatccagct aacggctaaa atggtcagtc gtggagaaat ccacgccagt
2901 agacttacaa gtctctgagg tgcctttgaa accatctcct aggtttcttc
2951 ggaaggactt cggtccgtgt acttccagca caagatgctg gtattagggt
3001 acaggcatcc ccccactttg gtgggggtct ctttaaggag acca