Sequence of DPV Prunus necrotic ringspot virus

Prunus necrotic ringspot virus isolate PS 14/22 movement protein (mp) gene, partial cds; and capsid protein (cp) gene, complete cds.

ACC No: AF170159

Dated: 2000-08-02 | Length: 925 | CRC: 1179170340

                !!NA_SEQUENCE 1.0
ID   AF170159   standard; RNA; VRL; 925 BP.
XX
AC   AF170159;
XX
SV   AF170159.1
XX
DT   02-AUG-2000 (Rel. 64, Created)
DT   02-AUG-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Prunus necrotic ringspot virus isolate PS 14/22 movement protein (mp) gene,
DE   partial cds; and capsid protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Prunus necrotic ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Ilarvirus.
XX
RN   [1]
RP   1-925
RA   Vaskova D., Petrzik K., Karesova R.;
RT   "Variability and molecular typing of the woody-tree infecting prunus
RT   necrotic ringspot ilarvirus";
RL   Arch. Virol. 145(4):699-709(2000).
XX
RN   [2]
RP   1-925
RA   Vaskova D.;
RT   ;
RL   Submitted (21-JUL-1999) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Plant Molecular Biology, Academy of Sciences of the Czech
RL   Republic, Branisovska 31, Ceske Budejovice 370 05, Czech Republic
XX
DR   SPTREMBL; Q9IMS0; Q9IMS0.
DR   SPTREMBL; Q9IMS1; Q9IMS1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .925
FT                   /chromosome="RNA3"
FT                   /country="Czech Republic: Holovousy"
FT                   /db_xref="taxon:37733"
FT                   /organism="Prunus necrotic ringspot virus"
FT                   /isolate="PS 14/22"
FT                   /specific_host="flowering cherry var. Shirofuga Kanzan"
FT   CDS             <1. .159
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IMS1"
FT                   /gene="mp"
FT                   /product="movement protein"
FT                   /protein_id="AAF89706.1"
FT                   /translation="KRLGDNRKVLTIQPKAPIVEEIKDDVEPLGSNGENHMEEKTVTVK
FT                   VGSSGSA"
FT   CDS             235. .915
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IMS0"
FT                   /gene="cp"
FT                   /product="capsid protein"
FT                   /protein_id="AAF89707.1"
FT                   /translation="MVCRICNHTHAGGCRSCKKCHPNDALVPLRAQQRAANNPSRSRNP
FT                   NRVSSGVGPAIRPQPVVKTTWTVRGPNMPPRIPKGYVAHNHREVTTTEAVKYLSIDFTT
FT                   TLPQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVDQPDGPNALSRKGFLKDQPRGWQ
FT                   FEPPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDED
FT                   LLEI"
XX
SQ   Sequence 925 BP; 233 A; 194 C; 258 G; 240 T; 0 other;

AF170159  Length: 925  December 21, 2001 14:54  Type: N  Check: 5239  ..

       1  aaacgactag gggataatag aaaggttttg actattcaac cgaaagcccc
      51  gattgtagag gaaattaagg acgatgttga accgttaggt tcgaatggtg
     101  aaaatcatat ggaagagaag actgtgaccg ttaaggtcgg tagttctgga
     151  agtgcttgag tgactatgtc acgagcgtgc gctttgcgcg agcgtttttc
     201  ttttctttct tccgaatacc tctttcattt gataatggtt tgccgaattt
     251  gcaatcatac ccacgctggt ggatgccgtt cttgcaagaa gtgccatccg
     301  aatgatgctc tggtcccact cagggctcaa caaagggctg cgaataaccc
     351  gagtaggagt aggaacccga atagggtttc gagcggtgta ggacctgcga
     401  tccgaccgca accggtcgtg aagaccactt ggaccgtgag gggtccgaat
     451  atgcctcccc gaattcctaa gggttatgtg gcacataatc accgagaggt
     501  gacgacgaca gaggcagtga agtacttgag tattgacttc acgaccactc
     551  tccctcagtt gatgggtcag aatttgacct tattaactgt tatagtccga
     601  atgaactcta tgagttcgaa tggttggatt gggatggtgg aggactataa
     651  ggtggatcaa cctgatggtc cgaatgccct gtctaggaag gggttcttga
     701  aggaccaacc gagaggttgg cagttcgaac ctccctccga tttagatttc
     751  gacacctttg cgcgtacgca tcgtgtcgtc atcgaattca agaccgaagt
     801  gcccgctggg gccaaggtct tggttaggga tttgtacgta gtggtaagtg
     851  acttaccacg agtgcaaatt ccgactgatg tcttgctggt cgatgaagac
     901  ctgcttgaga tctagagtga gataa