Sequence of DPV Tomato leaf curl Laos virus
Tomato leaf curl Laos virus complete genome.
ACC No: AF195782
Dated: 2005-04-15 | Length: 2748 | CRC: 651777298
!!NA_SEQUENCE 1.0
ID AF195782 standard; genomic DNA; VRL; 2748 BP.
XX
AC AF195782;
XX
SV AF195782.1
XX
DT 26-OCT-1999 (Rel. 61, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Tomato leaf curl Laos virus complete genome.
XX
KW .
XX
OS Tomato leaf curl Laos virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2748
RA Tsai W.S., Nakhla M.K., Maxwell D.P., Green S.K., Black L.L.;
RT "Tomoto leaf curl geminivirus from Laos";
RL Unpublished.
XX
RN [2]
RP 1-2748
RA Tsai W.S., Nakhla M.K., Maxwell D.P., Green S.K., Black L.L.;
RT ;
RL Submitted (18-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL Plant pathology-Virology, Asian Vegetable Research and Development Center,
RL P. O. BOX 42, Shanhua, Tainan, Taiwan, Republic of China
XX
FH Key Location/Qualifiers
FH
FT source 1. .2748
FT /country="Laos"
FT /db_xref="taxon:223345"
FT /mol_type="genomic DNA"
FT /organism="Tomato leaf curl Laos virus"
FT /strain="TLCV-LA"
FT CDS 133. .483
FT /codon_start=1
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q9QCV7"
FT /gene="V2"
FT /product="pre-coat protein"
FT /protein_id="AAF04151.1"
FT /translation="MWDPLLNEFPETVHGLRCMLAKKYVQEVQKTYSPDTVGYDLFCDL
FT IHLLNTKNYEQASSRYSHFYSRLQGTPPSELRHPLYQSCCCPHCPRHKQKTSMDSEAHV
FT SETQNVQNVQKP"
FT CDS 293. .1066
FT /codon_start=1
FT /db_xref="GOA:Q9QCV6"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q9QCV6"
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="AAF04152.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFDTPYTSRAAVPTVLVTNKRRAW
FT IQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDVSHVGKVLCVSDVTRGNGLTH
FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTAMDFGQVFNMYDNE
FT PSTATVKNDMRDRYQVLRKFTATVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1063. .1467)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q9QCV5"
FT /gene="C3"
FT /function="may enhance viral replication"
FT /product="C3 protein"
FT /protein_id="AAF04153.1"
FT /translation="MDSRTGEPITATQAESGAYIWTVPNPLYFKITKHIERPFFREHDI
FT ITVQIQFNHNLRKALGIHQCFPICQIWTRLHPRTGHFLRVFKYQCMKYLDRLGVISINN
FT VIRAINHVLYNVFEGTIDAQFSYIIKFNIY"
FT CDS complement(1208. .1615)
FT /codon_start=1
FT /db_xref="GOA:Q9QCV4"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q9QCV4"
FT /gene="C2"
FT /product="C2 protein"
FT /protein_id="AAF04154.1"
FT /translation="MQNSSPSRSHCTQVPIKVKHRIAKKRPIRRRRVDLPCGCSYFISI
FT NCHNHGFTHRGTHHCNSSREWRVYLDGPKSPLFQDNQAHRETILPGTRHNNSPNTVQPQ
FT PEESVGDTPMFSNLPNLDSFTSSDWAFLKSI"
FT CDS complement(1521. .2603)
FT /codon_start=1
FT /db_xref="GOA:Q9QCV3"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9QCV3"
FT /note="rep protein"
FT /gene="C1"
FT /product="replication-associated protein"
FT /protein_id="AAF04155.1"
FT /translation="MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQTLQTPTNKKYIK
FT ICRELHEDGSPHLHVLIQFEGKYNCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYL
FT EKDGDTLDWGEFQIDGRSARGGQQTANDAYAKALNSGSKSEALNVIKELAPKDYVLQFH
FT NLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVRDAAARPWRPKSIVIEGE
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPMQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWAVKNAEFITLTEPL
FT YSGTHQSQAQNSQEEANSQT"
FT CDS complement(2156. .2446)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q9QCV2"
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="AAF04156.1"
FT /translation="MGLLISTCLSSSKGNTTARITDSSTWCPQPGQHISIRTFRELNQA
FT QTLSPIWRRTETPSTGASFRSMEDLQGEDNRQPMTLTPKHLTAEVSQRLLM"
XX
SQ Sequence 2748 BP; 718 A; 568 C; 621 G; 841 T; 0 other;
AF195782 Length: 2748 April 19, 2005 08:53 Type: N Check: 2127 ..
1 accggatggc cgcgattttt ttaaaagtgg gcccccccac taaaatatgt
51 cccccactca gaacgcgccc tcagagccta tttagtgtgt ggtcccctat
101 ttatatcttg gtgaccaagt ttcatttcaa acatgtggga cccacttttg
151 aacgagttcc ctgagactgt tcatggtcta cggtgtatgc tagccaaaaa
201 atacgtacag gaagttcaga agacgtattc tccggatacg gttgggtacg
251 atttattttg tgatttaata catctcttaa acactaaaaa ttatgagcaa
301 gcgtccagca gatatagtca tttctactcc cgcctccaag gtacgccgcc
351 gtctgaactt cgacacccct tataccagtc gtgctgctgt ccccactgtc
401 ctcgtcacaa acaaaagacg agcatggatt cagaggccca tgtatcggaa
451 acccagaatg tacagaatgt acagaagccc tgatgtgccc aagggttgtg
501 aaggcccgtg taaggtccag tcatatgagc agagacatga tgtatcccat
551 gtgggtaaag tgttgtgtgt tagtgatgtc actcgtggaa atgggcttac
601 ccatcgtgtg ggtaagagat tctgtgtgaa gtccgtttat gtgttgggca
651 aaatttggat ggatgagaat atcaagacta agaaccatac caacactgta
701 atgttctttc tggtccgcga tagaaggccc ttcggtactg ctatggattt
751 tggtcaggtt tttaacatgt atgataacga gcccagtact gccactgtga
801 agaatgatat gagagatcgt taccaggtgc taaggaagtt tactgcaact
851 gtgactggtg gccagtatgc ctctaaggag caggcgttag ttaggaagtt
901 catgaaaatt aataactatg ttgtgtataa tcatcaggag gctgctaagt
951 atgaaaatca tactgagaat gcccttttat tgtatatggc atgtactcat
1001 gccagtaacc cagtgtatgc aacattgaag atcagaatct atttctatga
1051 ttctgttcag aattaataaa tattgaattt tattatatat gaaaattgag
1101 catcaattgt gccttcgaat acattgtaca atacatgatt gattgcccta
1151 attacattgt taatgctaat aactcctaat ctatctaaat acttcataca
1201 ttggtattta aatactctta agaaatgccc agtccgagga tgtaaacgag
1251 tccagatttg gcagattgga aaacattggt gtatccccaa cgctttcctc
1301 aggttgtggt tgaactgtat ttggactgtt attatgtcgt gttcccggaa
1351 gaatggtctc tcgatgtgct tggttatctt gaaatagagg ggatttggga
1401 ccgtccagat atacgcgcca ctctctgctt gagttgcagt gatgggttcc
1451 ccggtgcgtg aatccatggt tgtgacagtt gatgctaatg aagtatgagc
1501 atccacaggg aagatcaact ctacgtctgc gaattggcct cttcttggct
1551 attctgtgct tgactttgat gggtacctga gtacagtggc tccgtgaggg
1601 tgatgaattc tgcattcttt actgcccagt cttttaatgc tgaattcttt
1651 tcctcgtcca agtactcttt atacgatgat gttgggcctg gattgcagag
1701 gaagattgtt gggatcccac ctttaatttg catgggcttc ccgtactttg
1751 tgttgctttg ccaatctctt tgggccccca tgaattcttt aaagtgcttt
1801 agatagtggg ggtctacgtc atcaatgacg ttgtaccatg catcattact
1851 gtacaccttt ggactcaagt caaggtgccc acacaaataa ttatgtgggc
1901 ctaaagacct ggcccacatt gtctttcctg ttctgctctc tccctcgatg
1951 actatacttt tgggcctcca aggccgcgca gcggcatccc ttacattctc
2001 ggacacccac tcttcaagtt cttctggaac ttgatcaaaa gaagaagaaa
2051 gaaaaggaca aacaaaaacc tctaaaggag gtgcaaaaat cctatctaaa
2101 ttagaattta aattatgaaa ttgtaaaaca taatctttgg gggctaattc
2151 tttaattaca ttaagagcct ctgacttact tccgctgtta agtgctttgg
2201 cgtaagcgtc attggctgtc tgttgtcctc cccttgcaga tcttccatcg
2251 atctgaaact cgccccagtc gagggtgtct ccgtccttct ccagatagga
2301 cttaacgtct gagcttgatt tagctccctg aatgttcgga tggaaatgtg
2351 ctgacctggt tggggacacc aggtcgaaga atctgttatt cgtgcagttg
2401 tatttccctt cgaactggat aagcacgtgg agatgaggag acccatcttc
2451 gtgaagctct ctgcaaattt tgatatattt tttatttgtt ggggtttgta
2501 gggtttgtaa ttgggaaagt gcttcttcct ttgtgagtga gcactgggga
2551 tatgtaagaa aataattttt ggctttaata gaaaaacgtc cggctctagg
2601 cattttggaa ttggggggca ctctaattct ctgcaatcgg gggaacgggg
2651 gggcaattta tatgtgcccc ccaaatggca ttctcgtaat tcccaaaaga
2701 aattcaaatt caaattcaaa ttcctaaagc ggccatccgt ataatatt