Sequence of DPV Cucumber mosaic virus
Cucumber mosaic virus segment 2, complete sequence.
ACC No: AF198102
Dated: 2003-05-29 | Length: 3038 | CRC: 1486116819
!!NA_SEQUENCE 1.0
ID AF198102 standard; genomic RNA; VRL; 3038 BP.
XX
AC AF198102;
XX
SV AF198102.1
XX
DT 09-APR-2002 (Rel. 71, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Cucumber mosaic virus segment 2, complete sequence.
XX
KW .
XX
OS Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
XX
RN [1]
RP 1-3038
RA Yang R., Jones M.G.K., Dwyer G.I.;
RT ;
RL Submitted (25-OCT-1999) to the EMBL/GenBank/DDBJ databases.
RL WA State Agricultural Biotechnology Center, Murdoch University, South
RL Street, Murdoch, WA 6150, Australia
XX
DR GOA; Q8QVF9.
DR SPTREMBL; Q8QVF8; Q8QVF8.
DR SPTREMBL; Q8QVF9; Q8QVF9.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3038
FT /db_xref="taxon:12305"
FT /mol_type="genomic RNA"
FT /note="originally found infecting Lupinus angustifolius
FT subgroup: II"
FT /organism="Cucumber mosaic virus"
FT /isolate="LY"
FT /segment="2"
FT CDS 93. .2615
FT /codon_start=1
FT /db_xref="GOA:Q8QVF9"
FT /db_xref="SPTREMBL:Q8QVF9"
FT /note="Orf2a"
FT /gene="2a"
FT /product="2a protein"
FT /protein_id="AAM10537.1"
FT /translation="MTSPPPTFSFANLLNGSYGVDTPEEVERVRREQREDAEAALRNYK
FT PLPTVDVSESVPRDEPIVSQTVTTAPVTSAVDAFVSFGAEDYLEMSPSELLSAFELMVK
FT PLRIGEVLCPNFDRSLFISSVAMARTLLLAPLTSTRTLKRFEDLVAAIYLKTDFFLEDD
FT GPQTDVSQSDVPGYTFEPGQHSSGFEPPPICAKCDLILYQCPCFDFNALRESCAEKTFS
FT HDYVIEGLDGVIDNATLLSNLGPFLLPVHCSYSKTEDPDFVVDPSLARPTDRVDAHVVQ
FT AVCDTTLPTYVNYDDSFHQVFVDSADYSIDMDHVRLRQSDLVAKIPDGGHMLPVLNTGS
FT GHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERLRLSYMNVDALAKSNFVN
FT VVGNFHAYMQKWQSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVTDTLNVDRPVPATI
FT TFHKKTITSQFSPLFISLFERFQRCLRERIVLPVGKISSLEMTDFSVLNKHCLEIDLSK
FT FDKSQGEFHLMIQEHILNDLGCPAPVTKWWCDFHRFSYIKDKRAGVGMPISFQRRTGDA
FT FTYFGNTIVTMAEFAWCYDTDQFDRLLFSGDDSLAFSKLPPVGDPSKFTTLFNMEAKVM
FT EPAVPYICSKFLLSDEFGNTFSVPDPLREIQRLGTKKIPYSDNNDFLFAHFMSFVDRLK
FT FMDRMSQSCIDQLSIFFELKYKKSGNETAQVLGAFKKYTANFNAYKELYYSDRQQCDLI
FT NTFCISEFQVIRRTTVKKKKNGRVDSSGVDRRPPPSPFAGGETSKTKVSRQKPASEGLQ
FT KSQRESAIYSEIFPDVTIPRSRSRGLVS"
FT CDS 2413. .2715
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8QVF8"
FT /note="Orf2b"
FT /gene="2b"
FT /product="2b protein"
FT /protein_id="AAM10538.1"
FT /translation="MDVLTVVVSTADLHLAHLQEVKRRRRRSHVKNRRARGYKSPSERA
FT RSIARFFQMLPFHGVDPVDWFPDVVRSPSVTSLVSCESFDDTDWFAGNEWAEGSF"
XX
SQ Sequence 3038 BP; 724 A; 698 C; 677 G; 936 T; 3 other;
AF198102 Length: 3038 September 11, 2003 13:46 Type: N Check: 9792 ..
1 gtttattctc aagagcgtat ggttcaaccc ctgcctcctc tgtgaaatta
51 ccctagtttt attgatctac ttctagtctc ttttctgtta ctatgacaag
101 tcctccaccc actttctcat tcgccaatct gttgaatggc tcctatggtg
151 ttgacactcc cgaggaagtg gaacgcgtta gacgtgaaca acgcgaagat
201 gctgaggcgg ctttacgtaa ttataagcct ttacccactg tggatgtcag
251 tgagagtgtc cctagagacg aacctattgt ctcgcaaacc gtcactacag
301 ctcctgttac atcagccgtt gacgcgtttg tttcttttgg tgctgaggac
351 taccttgaaa tgtccccatc tgagctgctt tccgcttttg agttgatggt
401 caaacccttg cgtatcggtg aagtgttgtg cccgaatttt gatcgttcgc
451 tattcatctc cagcgtcgct atggctagga cgttgttgtt ggcaccactc
501 acatccaccc gaacgttgaa gcgttttgaa gaccttgtgg ccgcgatcta
551 tctaaaaact gatttttttt tagaagacga tgggccccag actgatgtct
601 cccaaagcga tgtgcccggt tataccttcg aaccagggca acactcatcc
651 ggttttgaac ccccccctat ttgtgctaaa tgtgacttga ttttgtatca
701 atgtccgtgt ttcgatttta acgcacttcg tgagtcttgc gcagagaaaa
751 cattctctca cgactatgtt atcgagggtc tcgatggtgt cattgataac
801 gctacgctgt tatcaaattt gggaccattt ttgttacctg tccattgttc
851 ttattcaaag accgaggacc ccgatttcgt cgttgatcct agtcttgcgc
901 gacctactga tagggttgat gcacatgtag ttcaagccgt ttgcgatacc
951 actctgccca cctatgttaa ctacgatgat tcctttcatc aagtctttgt
1001 ggactctgct gattattcca ttgacatgga tcacgttcgg ttacgtcaat
1051 ccgatttagt agcaaaaatt ccggatggtg ggcatatgtt accggtgttg
1101 aataccggga gtggtcacaa gagagtaggt actacgaagg aggtcttaac
1151 agcaataaag aaaagaaatg ctgatgtccc tgagcttggt gactctgtta
1201 atctgtcacg cctgagcaaa gcagtagccg aacggcttcg tctctcgtat
1251 atgaatgttg acgctttggc taaaagtaac tttgttaatg ttgtcggtaa
1301 ttttcacgct tacatgcaaa aatggcaatc ttctggactt tcttatgatg
1351 atcttcctga tcttcacgcg gagaatttac agttttatga tcacatgatt
1401 aagtccgatg ttaagccagt tgtcaccgac acgttgaacg tcgacagacc
1451 tgtcccagct actattacat ttcacaaaaa gaccataaca tcccagttct
1501 caccgttgtt tatatctctg tttgagagat tccagagatg ccttcgggaa
1551 cgtattgttc tgcccgttgg taagatttcc tcccttgaga tgactgattt
1601 ttcagtcttg aacaaacatt gtcttgaaat tgatttatct aaattcgaca
1651 aatctcaagg tgagttccac cttatgattc aagagcacat tctcaacgat
1701 cttggttgcc cagcacccgt caccaaatgg tggtgtgact ttcataggtt
1751 ttcctatatt aaagacaaac gtgctggggt tggaatgccc atcagctttc
1801 aacgccgtac tggtgacgct ttcacctatt ttggcaatac tattgtcacg
1851 atggctgagt ttgcttggtg ttatgacact gaccaatttg accgattgct
1901 cttttctggt gatgattctc tggctttttc taagctccca cctgttggag
1951 atcccagtaa gtttacaact ttattcaaca tggaagctaa ggtgatggaa
2001 cctgcagtac cttatatttg ttcgaagttt ctactctctg atgagtttgg
2051 taatacgttt tcagtccccg acccactacg tgaaatccag cggttaggta
2101 ccaagaagat accgtactcg gacaacaacg atttcttgtt cgctcatttt
2151 atgagttttg ttgacaggct gaagtttatg gacaggatgt cgcagtcctg
2201 tattgatcaa ttgtccattt tcttcgagtt gaaatacaag aagtccggga
2251 acgaaaccgc ccaagttttg ggcgcgttta agaagtacac cgctaatttt
2301 aacgcctata aggagcttta ttactctgac cgtcaacaat gtgacttgat
2351 caatacgttt tgtatatctg agttccaggt gattcgtcgc actaccgtta
2401 agaagaagaa gaatggacgt gttgacagta gtggtgtcga ccgccgacct
2451 ccacctagcc catttgcagg aggtgaaacg tcgaagacga aggtctcacg
2501 tcaaaaaccg gcgagcgagg ggttacaaaa gtcccagcga gagagcgcga
2551 tctatagcga gatttttcca gatgttacca ttccacggag tagatcccgt
2601 ggattggttt cctgatgtcg ttcgctctcc gtccgttacc agccttgttt
2651 cttgtgaatc ttttgatgat accgattggt ttgctggtaa cgaatgggcc
2701 gaagggtcgt tttgatttcc gacccttcgt cgtccgaaga cgttaaatta
2751 cactctcttt attgcgagtg ctgagttggt agttttcctc taaactatct
2801 gaagtcgcta aatccattac tggttgcgaa cgggttgtcc atccagctta
2851 cggctaaaat ggtcagtatg ccccaaaggc atgccgacac cctacagggt
2901 tgtcgaggta cccttgaaat catctcctan atttcttcgg aagggcntcg
2951 tgagaagctc gtgcacggta ntaccctgat attaccaaga gtgcgggtat
3001 cgcctgtggt tttccacagg ttctccataa ggagacca