Sequence of DPV Rice stripe virus

Rice stripe virus RNA3 isolate LY coat protein gene, partial cds.

ACC No: AF220106

Dated: 2000-01-19 | Length: 966 | CRC: -1945773282

                !!NA_SEQUENCE 1.0
ID   AF220106   standard; RNA; VRL; 966 BP.
XX
AC   AF220106;
XX
SV   AF220106.1
XX
DT   19-JAN-2000 (Rel. 62, Created)
DT   19-JAN-2000 (Rel. 62, Last updated, Version 1)
XX
DE   Rice stripe virus RNA3 isolate LY coat protein gene, partial cds.
XX
KW   .
XX
OS   rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-966
RA   Lin H., Wei T., Wu Z., Lin Q., Xie L.;
RT   "Variability of rice stripe virus in China";
RL   Unpublished.
XX
RN   [2]
RP   1-966
RA   Lin H., Wei T., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (29-DEC-1999) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, Institute of Plant Virology, Fujian
RL   Agricultural University, Fuzhou, Fujian 350002, P.R.China
XX
DR   SPTREMBL; Q9J0Y5; Q9J0Y5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .966
FT                   /chromosome="RNA3"
FT                   /db_xref="taxon:12331"
FT                   /organism="rice stripe virus"
FT                   /isolate="LY"
FT   CDS             complement(<1. .966)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9J0Y5"
FT                   /product="coat protein"
FT                   /protein_id="AAF26440.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 966 BP; 227 A; 250 C; 198 G; 291 T; 0 other;

AF220106  Length: 966  December 21, 2001 14:57  Type: N  Check: 6536  ..

       1  gtcatctgca ccttctgcct catcctcgaa gaactccttc accaacccgc
      51  tgacttcaga tgctgtcttt gaggtgttct cagcaaggat cttcatcagc
     101  ttgctctgct gagccaagta cagccttgtc tgattcccat aagtgctgat
     151  cgtattgaca gacataccag ccagcgcatc gaagattgtg gtcttcactt
     201  tcccattggt gatgaattca tctaagacct tctttctgcc atcttccttc
     251  tttttgtcag ccaggttctt tgacttgcat gtgatgacca ggagaccagt
     301  tgtgtacttc atcatgtcta tgtcttttgt cagaccacgc tccttcttct
     351  taccctctgg catggtcttt ttggttattt ggaaggagtg aatgatgtgc
     401  acaacaaaca aaatgtgact tagggagtga gttgtgcagt aaggagctgt
     451  ttcactctcc agtttgatat attgtggaac atagtcccac agtaggttgt
     501  cacatcctgt tagtcccagg tcagaagagt ccacagccat cttaacacca
     551  gaaatttgtc tcacaacttc atgtgagaca ttagggaata gctgagccag
     601  ccttccaagt gtgatggcat tggcatttgt tcccaccgag gacactatcc
     651  cataccttga caccaaggtc gaagcctctg tgcttccagc cgccactttc
     701  actttcttag tgacatctct cacaaagcca gtgcctctca catatctcat
     751  ggtgatgcac atagtcatat ccttggccag tgtgtcacca cctttgtcct
     801  tcaatatgcc aatcagagtt gcagcatcat agcctgcata ctctatctga
     851  ccagcaaagg tcacaacatc agctttatga gcagtcaggt aagacaacgc
     901  atctttggag atgtcattga ttgccttctg caaatcagct agagtggctg
     951  gcttgttggt acccat