Sequence of DPV Rice stripe virus

Rice stripe virus isolate JN major non-capsid protein gene, partial cds.

ACC No: AF221832

Dated: 2003-05-29 | Length: 534 | CRC: 271332618

                !!NA_SEQUENCE 1.0
ID   AF221832   standard; genomic RNA; VRL; 534 BP.
XX
AC   AF221832;
XX
SV   AF221832.1
XX
DT   03-FEB-2000 (Rel. 62, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 4)
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DE   Rice stripe virus isolate JN major non-capsid protein gene, partial cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-534
RA   Lin H., Wei T., Wu Z., Lin Q., Xie L.;
RT   "Isolate variability of rice stripe virus: implication of origin of RSV in
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-534
RA   Lin H., Wei T., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (06-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Institute of Plant Virology, Fujian Agricultural
RL   University, Fuzhou, Fujian 350002, P.R.China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .534
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="JN"
FT                   /segment="4"
FT   CDS             1. .>534
FT                   /codon_start=1
FT                   /note="NCP"
FT                   /product="major non-capsid protein"
FT                   /protein_id="AAF30290.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNMLQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
XX
SQ   Sequence 534 BP; 172 A; 109 C; 103 G; 150 T; 0 other;

 AF221832  Length: 534  January 7, 2004 15:41  Type: N  Check: 8234  ..

       1  atgcaagacg tacaaaggac aatagaagtt tctgttggtc ctattgtagg
      51  cctagattat actctattgt atgacactct gcccgagact gttagcgaca
     101  acattactct acctgatttg aaagatccag agagagtcac ggaagatact
     151  aagaagctga tactcaaagg ctgtgtttac atagcatatc atcacccctt
     201  ggagactgat acccttttca tcaaagttca caaacatata ccagagtttt
     251  gtcactcatt cctatcacac cttttaggag gtgaagatga tgacaatgct
     301  cttatagaca ttggtctgtt tttcaacatg ctgcaaccct ctttgggtgg
     351  ttggataacc aagaattttc ttagacaccc taataggatg tctaaggacc
     401  aaattaaaat gctcctggat cagattatca agatggctaa ggctgagagc
     451  tcagacacag aagagtatga gaaagtgtgg aagaagatgc caacttactt
     501  tgaatcaatt attcaacctc ttctacacaa aaca