Sequence of DPV Lettuce infectious yellows virus

Lettuce infectious yellows virus defective RNA 2 haplotype M46 P5 gene, complete cds.

ACC No: AF229373

Dated: 2000-05-23 | Length: 1398 | CRC: 2080949413

                !!NA_SEQUENCE 1.0
ID   AF229373   standard; RNA; VRL; 1398 BP.
XX
AC   AF229373;
XX
SV   AF229373.1
XX
DT   27-APR-2000 (Rel. 63, Created)
DT   23-MAY-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Lettuce infectious yellows virus defective RNA 2 haplotype M46 P5 gene,
DE   complete cds.
XX
KW   .
XX
OS   Lettuce infectious yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-1398
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   "A heterogeneous population of defective RNAs is associated with Lettuce
RT   infectious yellows virus (LIYV)";
RL   Virology 271:205-212(2000).
XX
RN   [2]
RP   1-1398
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   ;
RL   Submitted (31-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA
RL   95616, USA
XX
DR   SPTREMBL; Q9ICD2; Q9ICD2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1398
FT                   /chromosome="RNA 2"
FT                   /db_xref="taxon:31713"
FT                   /haplotype="M46"
FT                   /note="defective RNA segment"
FT                   /organism="Lettuce infectious yellows virus"
FT   CDS             327. .446
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9ICD2"
FT                   /product="P5"
FT                   /protein_id="AAF65748.1"
FT                   /translation="MSILLFFLMSILVWFIFTILKLLFVNTDSEVNIPNKSRF"
XX
SQ   Sequence 1398 BP; 509 A; 182 C; 238 G; 469 T; 0 other;

AF229373  Length: 1398  December 21, 2001 14:57  Type: N  Check: 4024  ..

       1  ggtaatcaca attaccattg ggcgaaggcc aggtgtgccg taaacctaaa
      51  atatgattgt gttacggatc ctactctttt gagtagttac attatgttat
     101  gttaagatcc ttgcgtctac tcttggagaa tttcgatggc acttgagtga
     151  cgtaagttac tttttctccc taaaatccaa aatcccaaaa atccaaattt
     201  tagttaatag cagtagctgt cgcaaaccgt accctaccct aattaaaact
     251  agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagaa
     301  ctctcaggtc ttctctagta taggtcatgt cgatattatt attttttctt
     351  atgtccatat tagtatggtt tatttttacc attttaaagt tattatttgt
     401  aaatactgat agtgaagtaa atataccgaa taaaagtaga ttttagaagt
     451  ttccataatt cgtaataagt attttatcaa taaaaagtag agtgataagt
     501  ctgttaataa aattttatta atgtgcaggt atattgtaaa accaaaaata
     551  aaaacagttt ctttaagtta gaataaaagt ttttctaaaa tttaaaaatt
     601  tatgtttatt tggtgtttga tggatttcat ctcttctaaa catgggaaaa
     651  gtgtcgctga tataaattca gggatgaata ctttgattaa cattagaaag
     701  tgcctcaatg gaagtggtaa agttgtgtcg ataactgata gttacgataa
     751  aacttatttc cacagtcaaa gaggattgac caatgttgac tcaaggataa
     801  acatagatat attggagata gatttcatta gtattattga cgatcttcaa
     851  ataatattta gaggtttaat ttacaaagat aaaggttttc tagatagtgc
     901  ggacttgtta gatttagata agaaaacaac tactagaaaa tttcaagaat
     951  atttcaatat tctaagaata aaaatcatag agaaaattgg aatgacaaaa
    1001  acattccatt tcaatataga ttttagaaac acgatctctc ctttagataa
    1051  gcaaaggaaa tgttcaattt caagttctca taagaaaacc aacagattga
    1101  acgatctcaa taattatata acatatctaa atgataatat tgtgttgaca
    1151  tttagatgga aaggagtagg attcggagga ctatcattaa atgatataaa
    1201  aatttaaaac acaagcgggt aagttggata aggtaatatc cgcaaggtcg
    1251  aatagggttt gtattaatca gactatttgt aaatccttaa aagagacatg
    1301  aacgataatt caatttgatc agagagtggt gattgaatta ttcgatgata
    1351  aatggtttaa aaccatttat cattctagtg tatctcgtat actagacc