Sequence of DPV Lettuce infectious yellows virus

Lettuce infectious yellows virus defective RNA 2 haplotype M16 P5 gene, complete cds.

ACC No: AF229374

Dated: 2000-05-23 | Length: 1405 | CRC: -1830884230

                !!NA_SEQUENCE 1.0
ID   AF229374   standard; RNA; VRL; 1405 BP.
XX
AC   AF229374;
XX
SV   AF229374.1
XX
DT   27-APR-2000 (Rel. 63, Created)
DT   23-MAY-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Lettuce infectious yellows virus defective RNA 2 haplotype M16 P5 gene,
DE   complete cds.
XX
KW   .
XX
OS   Lettuce infectious yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-1405
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   "A heterogeneous population of defective RNAs is associated with Lettuce
RT   infectious yellows virus (LIYV)";
RL   Virology 271:205-212(2000).
XX
RN   [2]
RP   1-1405
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   ;
RL   Submitted (31-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA
RL   95616, USA
XX
DR   SPTREMBL; Q9ICD2; Q9ICD2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1405
FT                   /chromosome="RNA 2"
FT                   /db_xref="taxon:31713"
FT                   /haplotype="M16"
FT                   /note="defective RNA segment"
FT                   /organism="Lettuce infectious yellows virus"
FT   CDS             327. .446
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9ICD2"
FT                   /product="P5"
FT                   /protein_id="AAF65749.1"
FT                   /translation="MSILLFFLMSILVWFIFTILKLLFVNTDSEVNIPNKSRF"
XX
SQ   Sequence 1405 BP; 512 A; 182 C; 236 G; 475 T; 0 other;

AF229374  Length: 1405  December 21, 2001 14:57  Type: N  Check: 8298  ..

       1  ggtaatcaca attaccattg ggcgaaggcc aggtgtgccg taaacctaaa
      51  atatgattgt gttacggatc ctactctttt gagtagttac attatgttat
     101  gttaagatcc ttgcgtctac tcttggagaa tttcgatggc acttgagtga
     151  cgtaagttac tttttctccc taaaatccaa aatcccaaaa atccaaattt
     201  tagttaatag cagtagctgt cgcaaaccgt accctaccct aattaaaact
     251  agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagaa
     301  ctctcaggtc ttctctagta taggtcatgt cgatattatt attttttctt
     351  atgtccatat tagtatggtt tatttttacc attttaaagt tattatttgt
     401  aaatactgat agtgaagtaa atataccgaa taaaagtaga ttttagaagt
     451  ttccataatt tgtaataagt attttatcaa taaaaagtag agtgataagt
     501  ctgttaataa aattttatta atgtgcaggt atattgtaaa accaaaaata
     551  aaaacagttt ctttaagtta gaataaaagc ttttctaaaa tttaaaaatt
     601  tatgtttatt ttttatttgg tgtttgatgg atttcatctc ttctaaacat
     651  gggaaaagtg tcgctgatat aaattcaggg atgaatactt tgattaacat
     701  tagaaagtgc ctcaatggaa gtggtaaagt tgtgtcgata actgatagtt
     751  acaataaaac ttatttccac agtcaaagag gattgaccaa tgttgactca
     801  aggataaaca tagatatatt gaagttagat ttcattagta ttattgacga
     851  tcttcaaata atatttagag gtttaattta caaagataaa gggtttctag
     901  atagtgcgga cttgttagat ttagataaga aaacaactac tagaaaattt
     951  caagaatatt tcaatattct aaaaataaaa atcatagaga aaattggaat
    1001  gacaaaaaca ttccatttca atatagattt tagaaacacg atctctcctt
    1051  tagataagca aaggaaatgt tcaatttcaa gttctcataa gaaaaccaac
    1101  agattgaacg atctcaataa ttatataaca tatctaaatg ataatattgt
    1151  gttgacattt agatggaaag gagtaggatt cggaggacta tcattaaatg
    1201  atataaaaat ttaaaacaca agcgggtaag ttggataagg taatatccgc
    1251  aaggtcgaat agggtttgta ttaatcagac tatttgtaaa tccttaaaag
    1301  agacatgaac gataattcaa tttgatcaga gagtggtgat tgaattattc
    1351  gatgataaat ggtttaaaac catttatcat tctagtgtat ctcgtatact
    1401  agacc