Sequence of DPV Lettuce infectious yellows virus

Lettuce infectious yellows virus defective RNA 2 haplotype M4 P5 gene, complete cds.

ACC No: AF229375

Dated: 2000-05-23 | Length: 1419 | CRC: -987270394

                !!NA_SEQUENCE 1.0
ID   AF229375   standard; RNA; VRL; 1419 BP.
XX
AC   AF229375;
XX
SV   AF229375.1
XX
DT   27-APR-2000 (Rel. 63, Created)
DT   23-MAY-2000 (Rel. 63, Last updated, Version 2)
XX
DE   Lettuce infectious yellows virus defective RNA 2 haplotype M4 P5 gene,
DE   complete cds.
XX
KW   .
XX
OS   Lettuce infectious yellows virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
XX
RN   [1]
RP   1-1419
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   "A heterogeneous population of defective RNAs is associated with Lettuce
RT   infectious yellows virus (LIYV)";
RL   Virology 271:205-212(2000).
XX
RN   [2]
RP   1-1419
RA   Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT   ;
RL   Submitted (31-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA
RL   95616, USA
XX
DR   SPTREMBL; Q9IZR3; Q9IZR3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1419
FT                   /chromosome="RNA 2"
FT                   /db_xref="taxon:31713"
FT                   /haplotype="M4"
FT                   /note="defective RNA segment"
FT                   /organism="Lettuce infectious yellows virus"
FT   CDS             327. .446
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IZR3"
FT                   /product="P5"
FT                   /protein_id="AAF65750.1"
FT                   /translation="MSILLFFLMSILVWFIFTILKLLFVNADSEVNIPNKSRF"
XX
SQ   Sequence 1419 BP; 514 A; 185 C; 238 G; 482 T; 0 other;

AF229375  Length: 1419  December 21, 2001 14:57  Type: N  Check: 1369  ..

       1  ggtaatcaca attaccattg tgcgaaggcc aggtgtgccg tagacctaaa
      51  atatgattgt gttacggatc ctactctttt gagtagttac attatgttat
     101  gttaagatcc ttgcgtctac tcttggagaa tttcgatggc acttgagtga
     151  cgtaagttac tttttctccc taaaatccaa aatcccaaaa atccaaattt
     201  tagttaatag cagtagctgt cgcaaaccgt accctaccct aattaaaact
     251  agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagaa
     301  ctctcaggtc ttctctagta taggtcatgt cgatattatt attttttctt
     351  atgtccatat tagtatggtt tatttttacc attttaaagt tattatttgt
     401  aaatgctgat agtgaagtaa atataccgaa taaaagtaga ttttagaagt
     451  ttccataatt tgtaataagt attttatcaa taaaaagtag agtgataagt
     501  ctgttaataa aattttatta atgtgcaggt atattgtaaa accaaaaata
     551  aaaacagttt ctttaagtta gaataaaagt ttttctaaaa tttaaaaatt
     601  tatgtttatt ttttatttgt cagatacctt ttggtgtttg atggatttca
     651  tctcttctaa acatgggaaa agtgtcgctg atataaattc agggatgaat
     701  actttgatta acattagaaa gtgcctcaat ggaagtggta aagttgtgtc
     751  gataactgat agttacaata aaacttattt ccacagtcaa agaggattga
     801  ccaatgttga ctcaaggata aacatagata tattgaagat agatttcatt
     851  agtattattg acgatcttca aataatattt agaggtttaa tttacaaaga
     901  taaaggtttt ctagatagtg cggacttgtt agatttagat aagaaaacaa
     951  ctactagaaa atttcaagaa tatttcaaca ttctaaaaat aaaaatcata
    1001  gagaaaattg gaatgacaaa aacattccat ttcaatatag attttagaaa
    1051  cacgatctct cctttagata agcaaaggaa atgttcaatt tcaagttctc
    1101  ataagaaaac caacagattg aacgatctca ataattatat aacatatcta
    1151  aatgataata ttgtgttgac atttagatgg aaaggagtag gattcggagg
    1201  actatcatta aatgatataa aaatttaaaa cacaagcggg taagttggat
    1251  aaggtaatat ccgcaaggtc gaatagggtt tgtattaatc agactatttg
    1301  taaatcctta aaagagacat gaacgataat tcaatttgat cagagagtgg
    1351  tgattgaatt attcgatgat aaatggttta aaaccattta tcattctagt
    1401  gtatctcgta tactagacc