Sequence of DPV Lettuce infectious yellows virus
Lettuce infectious yellows virus defective RNA 2 haplotype M34 P5 and P26 genes, complete cds.
ACC No: AF229376
Dated: 2000-05-23 | Length: 1763 | CRC: 1527651151
!!NA_SEQUENCE 1.0
ID AF229376 standard; RNA; VRL; 1763 BP.
XX
AC AF229376;
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SV AF229376.1
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DT 27-APR-2000 (Rel. 63, Created)
DT 23-MAY-2000 (Rel. 63, Last updated, Version 2)
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DE Lettuce infectious yellows virus defective RNA 2 haplotype M34 P5 and P26
DE genes, complete cds.
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KW .
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OS Lettuce infectious yellows virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC Closterovirus.
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RN [1]
RP 1-1763
RA Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT "A heterogeneous population of defective RNAs is associated with Lettuce
RT infectious yellows virus (LIYV)";
RL Virology 271:205-212(2000).
XX
RN [2]
RP 1-1763
RA Rubio L., Yeh H.H., Tian T., Falk B.W.;
RT ;
RL Submitted (31-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of California Davis, 1 Shields Ave., Davis, CA
RL 95616, USA
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DR SPTREMBL; Q9ICD2; Q9ICD2.
DR SPTREMBL; Q9IZR2; Q9IZR2.
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FH Key Location/Qualifiers
FH
FT source 1. .1763
FT /chromosome="RNA 2"
FT /db_xref="taxon:31713"
FT /haplotype="M34"
FT /note="defective RNA segment"
FT /organism="Lettuce infectious yellows virus"
FT CDS 327. .446
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9ICD2"
FT /product="P5"
FT /protein_id="AAF65751.1"
FT /translation="MSILLFFLMSILVWFIFTILKLLFVNTDSEVNIPNKSRF"
FT CDS 889. .1572
FT /codon_start=1
FT /db_xref="SPTREMBL:Q9IZR2"
FT /product="P26"
FT /protein_id="AAF65752.1"
FT /translation="MNNFPEIFDDESTCDYDKEIDHQELSDTFWCLMDFISSKHGKSVA
FT DINSGMNTLINIRKSLNGSGKVVSITDSYNKTYFHSQRGLTNVDSRINIDILKIDFISI
FT IDDLQIIFRGLIYKDKGFLDSADLLDLDKKTTTRKFQEYFNILKIKIIEKIGMTKTFHF
FT NIDFRNTISPLDKQRKCSISGSHKKTNRLNDLNNYITYLNDNIVLTFRWKGVGFGGLSL
FT NDIKI"
XX
SQ Sequence 1763 BP; 648 A; 242 C; 304 G; 569 T; 0 other;
AF229376 Length: 1763 December 21, 2001 14:57 Type: N Check: 6464 ..
1 ggtaatcaca attaccattg ggcgaaggcc aggtgtgccg taaacctaaa
51 atatgattgt gttacggatc ctactctttt gagtagttac attatgttat
101 gttaagatcc ttgcgtctac tcttggagaa tttcgatggc acttgagtga
151 cgtaagttac tttttctccc taaaatccaa aatcccaaaa atccaaattt
201 tagttaatag cagtagctgt cgcaaaccgt accctaccct aattaaaact
251 agactatgct gcgaatacta agagcggatt aaatctgctc gcttagagaa
301 ctctcaggtc ttctctagta taggtcatgt cgatattatt attttttctt
351 atgtccatat tagtatggtt tatttttacc attttaaagt tattatttgt
401 aaatactgat agtgaagtaa atataccgaa taaaagtaga ttttagaagt
451 ttccataatt tgtaataagt attttatcaa taaaaagtag agtgataagt
501 ctgttaataa aattttatta atgtgcaggt atattgtaaa accaaaaata
551 aaaacagttt ctttaagtta gaataaaagt ttttctaaaa tttaaaaatt
601 tatgtttatt ttttatttgt cgcatactca caatttagaa agagttctac
651 taagacatta tgctcaagaa atcttaatac tactaagaaa caaagtgtta
701 gaatggccta ggaaattagc aagaaataag ggcattttcg aacaatatac
751 ctacatggcc tgtgactttt tcgacaccgc agaattagaa ttgacggagg
801 ctgagaccac agctttgacg acggtaaagt cttggactat gaaccattat
851 aagaagaaaa gacagatagt taatagttca caattagaat gaataatttt
901 cctgaaattt ttgatgatga gtccacatgc gactatgata aagagataga
951 tcaccaagaa ctatcagata ccttttggtg tttgatggat ttcatctctt
1001 ctaaacatgg gaaaagtgtc gctgatataa attcagggat gaatactttg
1051 attaacatta gaaagagcct caatggaagt ggtaaagttg tgtcgataac
1101 tgatagttac aataaaactt atttccacag tcaaagagga ttgaccaatg
1151 ttgactcaag gataaacata gatatattga agatagattt cattagtatt
1201 attgacgatc ttcaaataat atttagaggt ttaatttaca aagataaagg
1251 ttttctagat agtgcggact tgttagattt agataagaaa acaactacta
1301 ggaaatttca agaatatttc aatattctaa aaataaaaat catagagaaa
1351 attggaatga caaaaacatt ccatttcaat atagatttta gaaacacgat
1401 ctctccttta gataagcaaa ggaaatgttc aatttcaggt tctcataaga
1451 aaaccaacag attgaacgat ctcaataatt atataacata tctaaatgat
1501 aatattgtgt tgacatttag atggaaagga gtaggattcg gaggactatc
1551 attaaatgat ataaaaattt aaaacacaag cgggtaagtt ggataaggta
1601 atatccgcaa ggtcgaatag ggtttgtatt aatcagacta tttgtaaatc
1651 cttaaaagag acatgaacga taattcaatt tgatcagaga gtggagattg
1701 aactattcga tgataaatgg tttaaaacca tttatcattc tagtgtatct
1751 cgtatactag acc