Sequence of DPV Bhendi yellow vein mosaic virus
Bhendi yellow vein mosaic virus-[Madurai] segment A, complete sequence.
ACC No: AF241479
Dated: 2005-04-15 | Length: 2741 | CRC: 2043508577
!!NA_SEQUENCE 1.0
ID AF241479 standard; circular genomic DNA; VRL; 2741 BP.
XX
AC AF241479;
XX
SV AF241479.1
XX
DT 14-APR-2000 (Rel. 63, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 7)
XX
DE Bhendi yellow vein mosaic virus-[Madurai] segment A, complete sequence.
XX
KW .
XX
OS Bhendi yellow vein mosaic virus-[Madurai]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2741
RX DOI; 10.1006/viro.2002.1768.
RX MEDLINE; 22462883.
RX PUBMED; 12573576.
RA Jose J., Usha R.;
RT "Bhendi yellow vein mosaic disease in India is caused by association of a
RT DNA Beta satellite with a begomovirus";
RL Virology 305(2):310-317(2003).
XX
RN [2]
RP 1-2741
RA Usha R., Jose J.;
RT ;
RL Submitted (03-MAR-2000) to the EMBL/GenBank/DDBJ databases.
RL Plant Biotechnology, Madurai Kamaraj University, School of Biotechnology,
RL Madurai, Tamil Nadu 625021, India.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2741
FT /country="India"
FT /db_xref="taxon:221523"
FT /mol_type="genomic DNA"
FT /note="whitefly-transmitted gemini virus"
FT /organism="Bhendi yellow vein mosaic virus-[Madurai]"
FT /segment="A"
FT CDS 120. .485
FT /codon_start=1
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q9IZ52"
FT /gene="AV2"
FT /product="AV2"
FT /protein_id="AAF63752.1"
FT /translation="MWDPLLNEFPDTVHGFRCMLSLKYLQLLSQDYSPDTLGYELIRDL
FT ICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQ
FT ETQNVPDVQKSGCSKGM"
FT CDS 280. .1050
FT /codon_start=1
FT /db_xref="GOA:Q9IZ51"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q9IZ51"
FT /gene="AV1"
FT /product="coat protein AV1"
FT /protein_id="AAF63751.1"
FT /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWT
FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGQYAAREQALVKKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT CDS complement(628. .984)
FT /codon_start=1
FT /db_xref="InterPro:IPR006892"
FT /db_xref="UniProt/TrEMBL:Q9IZ50"
FT /gene="AC5"
FT /product="AC5"
FT /protein_id="AAF63750.1"
FT /translation="MGTSHIKHQCILGVILVFSCLLLVVNNIIVNPDKFLNQRLFPRCI
FT LTTSNGCMPFPQHLVTIPMHVLHGRRTGLIIKHIKYFTKILWFIYRSSITNKEKHHRIR
FT MVLRLDVLVHPYLT"
FT CDS complement(1052. .1456)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q9IZ49"
FT /gene="AC3"
FT /product="AC3"
FT /protein_id="AAF63748.1"
FT /translation="MDSRTGERITAAQAKNGVYIWKVPNPLYFKILNHDNRPFTTNMDI
FT ITLRIHFNYNLRKALGIHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNL
FT VIKAVEHVLYNVVNQTMYVDQYSDIKFKLY"
FT CDS complement(1170. .1601)
FT /codon_start=1
FT /db_xref="GOA:Q9IZ48"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q9IZ48"
FT /gene="AC2"
FT /product="AC2"
FT /protein_id="AAF63747.1"
FT /translation="MQHSSFSPNRCTRVPIKVQHKEAKRVHRRRRVDLECGCSYYLSIN
FT CHNHGFSHRGTHHCSSSKEWRLYLEGSKSPLFQDPQPRQPSIHDEHGHNNTQDPFQLQP
FT TESSGNTQVFSNLPNLDDLTPSDWSFLKGIQNPSPQISQ"
FT CDS complement(1498. .2586)
FT /codon_start=1
FT /db_xref="GOA:Q9IZ47"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9IZ47"
FT /gene="AC1"
FT /product="replicase AC1"
FT /protein_id="AAF63746.1"
FT /translation="MPPRRFVINSKNYFLTYPQCSLNKEEALSQLQNIQTPTNKKYIKI
FT CSELHENGEPHLHVLIQFEGKYKCQNQRFFDLVATNRSAHFHPNIQGAKSSSDVKSYID
FT KDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKAEALRVLKELAPKDYVLQYHN
FT LNSNLDRIFTPPQEVYVCPFLSSSFDQVPEELEEWASENVMDAAARPQRPLSLVLEGES
FT RTGKTQWARSLGPHNYLCGHLDLSPKVYSNDAWFNIIDDVDPHYLKHFKEFMGAQRDWQ
FT SNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEEKNSALKAWALKNAAFVFLTQPLY
FT SGTNQSSTQGSEASAQEETSGP"
FT CDS complement(2130. .2438)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q9IZ46"
FT /gene="AC4"
FT /product="AC4"
FT /protein_id="AAF63749.1"
FT /translation="MKMGNLIFTCSSSSKENTSARIRDSSTWSPQTGQHISIQTFRELN
FT PAPTSSPISTRTEIPLNGGNSRSTADLQGEDNNQPMTLTRQHLTQEVRQRLLEFLKN"
XX
SQ Sequence 2741 BP; 725 A; 545 C; 639 G; 832 T; 0 other;
AF241479 Length: 2741 April 19, 2005 08:55 Type: N Check: 3487 ..
1 accggatggc cgcgcgattt tttaagtggt gggtccagaa cgcacgacga
51 tgcagactca aagcttagat aacgctcctt cggctataag tacgtgcgca
101 ctaagtttca attcaaaaaa tgtgggatcc actattaaac gaatttccgg
151 atacggttca cgggtttcgt tgtatgctat ctctaaaata tttgcaactt
201 ttgtcgcagg attattctcc agatacgctt gggtacgagt taatacggga
251 tttaatttgt attttacgtt cccgtaatta tgtcgaagcg agctgccgat
301 atcgtcattt ctacgcccgc gtcgaaagta cgccggcgtc tgaacttcgg
351 cagcccatac accagccgtg ctgctgcccc cattgtccgc gtcacaaaac
401 aacaggcatg gacaaacagg cctatgaaca ggaaacccag aatgtaccgg
451 atgtacagaa gtccggatgt tccaagggga tgtgagggtc cctgtaaggt
501 acagtcgttt gagtctcgac acgatgtcgt tcatattggt aaggtaatgt
551 gtatttcgga tgttacgcgt ggagtcggtt tgacccatcg tataggtaag
601 cgtttttgtg tcaagtcagt ttatgtttta ggtaagatat ggatggacga
651 gaacatcaag acgaagaacc atacgaattc ggtgatgttt ttccttgttc
701 gtgatcgacg accggtagat aaaccacaag attttggtga agtatttaat
751 atgtttgata atgagcccag tacggcgacc gtgaagaaca tgcataggga
801 tcgttaccag gtgttgagga aatggcatgc aaccgttact ggtggtcaat
851 atgcagcgag ggaacaggcg ttggttaaga aatttgtcag ggttaacaat
901 tatgttgttt acaaccagca ggaggcagga aaatacgaga atcacaccga
951 gaatgcattg atgctttata tggcttgtac ccatgctagt aacccagtgt
1001 atgctacgct taagattcgg atttattttt atgactctgt aacgaattga
1051 attaataaag tttgaatttt atatctgaat attggtctac atacattgtc
1101 tgattaacta cattgtacaa tacatgttcg acggctttaa taactaaatt
1151 aagtgagatt acacctagat tattgagata tttgaggact tgggttttga
1201 atacccttaa gaaaagacca gtcggagggt gtaaggtcgt ccagattcgg
1251 aaggttagaa aacacttgtg tattcccaga gctttccgta ggttgtagtt
1301 gaaatggatc ctgagtgtta ttatgtccat gttcgtcgtg aatggacggt
1351 tgtcgtggtt gaggatcttg aaatagaggg gatttggaac cttccagata
1401 tagacgccat tctttgcttg agctgcagtg atgcgttccc ctgtgcgaga
1451 atccatggtt gtggcagttg atgctaagat aataactgca tccgcattca
1501 aggtccactc gtctcctcct gtgcactcgc ttcgcttcct tgtgttgaac
1551 tttgattggt acccgagtac aacggttggg tgagaaagac gaatgctgca
1601 ttttttaaag cccacgcttt caaagctgag ttcttttcct cgtctaaaaa
1651 ctctttatag cttgcgttgg ggcctggatt gcagaggaag attgttggaa
1701 tgcctccttt aatttgaact ggcttcccgt actttgtgtt tgattgccag
1751 tccctttggg cccccatgaa ttctttaaag tgtttcagat aatgcgggtc
1801 aacatcatct ataatgttga accacgcatc gtttgaatac actttagggc
1851 ttagatccaa gtgcccacat aaataattat gtggccccaa ggaacgggcc
1901 cattgtgttt tcccagttct agactccccc tctagaacta aactcaaagg
1951 tctctgaggc cgcgcagcgg cgtccatgac gttctccgac gcccactctt
2001 caagttcttc tggaacttga tcaaaagaag aagataaaaa tggacaaaca
2051 taaacctcct gaggaggagt aaaaatccta tctaaatttg aatttaaatt
2101 atgatattgt aagacataat ctttgggggc taattcttta agaactctaa
2151 gagcctctgc cttacttcct gtgttaagtg ctgccgcgta agcgtcattg
2201 gctgattgtt gtcctcccct tgcagatctg ccgtcgatct ggaattcccc
2251 ccattcaagg gtatctccgt ccttgtcgat ataggacttg acgtcggagc
2301 tggatttagc tccctgaatg tttggatgga aatgtgctga cctgtttgtg
2351 gcgaccaagt cgaagaatct ctgattctgg cacttgtatt ttccttcgaa
2401 ctggatgagc acgtgaagat gaggttcccc attttcatga agctcactgc
2451 agatctttat gtatttttta tttgttgggg tttgtatatt ttgtagttgg
2501 gataatgcct cttctttatt aagagagcat tgtggataag taaggaaata
2551 atttttggaa ttgatgacaa aacgccttgg aggcatgttg actatttttg
2601 agacccgatt gaccgctctt acaactctcc ccagtatatc gggtccctat
2651 atatagtgag acccaaatgg cataattgta ataaaacaac tttaatttga
2701 aattcaaacg aaaaggctaa agcggccatc cgtataatat t