Sequence of DPV Tomato curly stunt virus
Tomato curly stunt virus - [South Africa] segment A component V2 protein, coat protein V1, C3 protein, C2 protein, and C1 protein genes, complete cds.
ACC No: AF261885
Dated: 2005-04-15 | Length: 2766 | CRC: -1983036635
!!NA_SEQUENCE 1.0
ID AF261885 standard; genomic DNA; VRL; 2766 BP.
XX
AC AF261885;
XX
SV AF261885.2
XX
DT 02-AUG-2000 (Rel. 64, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE Tomato curly stunt virus - [South Africa] segment A component V2 protein,
DE coat protein V1, C3 protein, C2 protein, and C1 protein genes, complete
DE cds.
XX
KW .
XX
OS Tomato curly stunt virus - [South Africa]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2766
RA Pieterson G., Idris A.M., Kruger K., Brown J.K.;
RT "Tomato curly stunt virus, a new Begomovirus of tomato within TYLCV-Is
RT cluster in South Africa";
RL Plant Dis. 84(7):810-810(2000).
XX
RN [2]
RP 1-2766
RA Pieterson G., Idris A.M., Kruger K., Brown J.K.;
RT ;
RL Submitted (28-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
XX
RN [3]
RC Sequence update by submitter
RP 1-2766
RA Pieterson G., Idris A.M., Kruger K., Brown J.K.;
RT ;
RL Submitted (18-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
XX
CC On Jul 18, 2002 this sequence version replaced gi:9652064.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2766
FT /country="South Africa"
FT /db_xref="taxon:269301"
FT /mol_type="genomic DNA"
FT /virion
FT /organism="Tomato curly stunt virus - [South Africa]"
FT /segment="A component"
FT CDS 139. .480
FT /codon_start=1
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q8JVF1"
FT /product="V2 protein"
FT /protein_id="AAM80473.1"
FT /translation="MWDPLLNEFPDSVHGFRCMLAVKYLQSVEATYEPNTLGHDLIRDL
FT ILVIRAKDYVEASRRYNHFHARLEGAEKAELRQPVHQPCCCPHCPRHKQATIMDVQAHV
FT SKAQDVQNV"
FT CDS 299. .1075
FT /codon_start=1
FT /db_xref="GOA:Q9IFU8"
FT /db_xref="InterPro:IPR000143"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q9IFU8"
FT /product="coat protein V1"
FT /protein_id="AAF91386.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPFTSRAVVPIAPGTNKRRSW
FT TYRPMYRKPKMYRMYRSPDVPRGCEGPCKIQSYEQRDDVKHTGIVRCISDITKGPGLTH
FT RTGKRFVVKSVYILGKVWMDENIKKQNHTTNVMFFLVRDRRPYGTSPMDFGQVFNMFDN
FT EPSTATVKNDLRDRFQVLRKFTATVVGGPSGLKEQALVKRFFRLNSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRVYFYDSVMN"
FT CDS complement(1072. .1476)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q8JVF0"
FT /product="C3 protein"
FT /protein_id="AAM80476.1"
FT /translation="MDLRTGELITAHQAQNGVYIWEITNPLYFKIINHDSRPFHTNHDI
FT ISIQIRFNHNLRKELGIHKCFLNFQVWTTLQPQTGRFLSVFKFQVFKYLDNLGVISINN
FT VIRAVDHVLYNVLVNTIDVVETHEIKFNIY"
FT CDS complement(1217. .1624)
FT /codon_start=1
FT /db_xref="GOA:Q8JVE9"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8JVE9"
FT /product="C2 protein"
FT /protein_id="AAM80475.1"
FT /translation="MRSSSPSTSHCTQVPIKVQHRIAKKRVVRRRRVDLDCGCTYYLHI
FT DCSNHGFTHRGTHHCSSGPEWRLYLGDNKSPLFQDYQPRQQTVPHEPRHHIDPDTVQPQ
FT PPEGTGDSQMFSQLPSLDDLTASDWSFLKRI"
FT CDS complement(1533. .2612)
FT /codon_start=1
FT /db_xref="GOA:Q8JVE8"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8JVE8"
FT /product="C1 protein"
FT /protein_id="AAM80474.1"
FT /translation="MAPPKRFQINSKNYFVTYPKCSLTKEESLSQLLNLETPTNKKYIK
FT ICRELHENGEPHLHVLIQFERKFNCKNHRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQVDGRSARGGCQNANDACADALNAGSAEAAMAIIREKLPKDFIFQYH
FT NLKTNLDRIFQAPPEPYISPFSSSSFDQVPEELEEWVSENVCGAAARPWRPNSIVIEGD
FT SRSGKTIWARSLGQHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNTSLKAWTIKNAVFITLNQPL
FT YSSPNQGPASNSQEESSQA"
XX
SQ Sequence 2766 BP; 735 A; 582 C; 642 G; 807 T; 0 other;
AF261885 Length: 2766 April 19, 2005 08:55 Type: N Check: 8014 ..
1 accggatggc cgtgccccca aaaaaaagtg gtccccacgc actattttat
51 gtcgaccaat cagaatgtcg ccttatcgct tagttatctg ctattttgtc
101 tttatatggg aaacttcgcg gaagttacca ttgtcaagat gtgggatcca
151 ctgttaaacg aattcccaga ctccgtccac ggttttcgtt gtatgcttgc
201 tgttaaatat ctgcagtccg ttgaagccac atacgagccc aacacattgg
251 gccacgatct tatacgagat ctgattctgg ttatcagggc aaaagattat
301 gtcgaagcgt cccgccgata taatcatttc cacgcccgcc tcgaaggtgc
351 ggagaaggct gaacttcgac agcccgttca ccagccgtgc tgttgtcccc
401 attgccccag gcacaaacaa gcgacgatca tggacgtaca ggcccatgta
451 tcgaaagccc aagatgtaca gaatgtatag aagccctgat gtccctcgag
501 gttgtgaagg cccatgtaag atccagtcgt atgaacagcg cgatgatgtg
551 aagcacaccg gtatagttag gtgtatcagt gacattacaa agggtcctgg
601 tctgacccat cgcacgggta aaaggttcgt ggtgaagtct gtctatatac
651 tcggtaaggt atggatggat gagaacatca agaagcagaa ccacactacc
701 aatgttatgt ttttcctagt ccgagataga aggccctatg gaacaagccc
751 aatggacttt gggcaggtgt ttaacatgtt tgataacgag cccagtacag
801 ccacggtgaa gaacgatctt cgtgatcgat tccaggtgtt gcgcaagttt
851 acagccaccg ttgttggtgg tccctctggt cttaaggagc aggctcttgt
901 gaagcgtttc ttcaggttaa acagccatgt aacctataac catcaggaag
951 cagccaagta cgagaaccat accgagaatg cgttgttgtt gtatatggca
1001 tgtacccatg cctctaatcc tgtgtatgcc acgttaaaaa tacgtgtata
1051 tttttatgac tcagtgatga attaataaat attaaatttt atttcatgtg
1101 tctcaacaac atcgatagtg tttacaagta cattataaag tacatgatca
1151 actgctctaa ttacattgtt aattgaaatt acacccaaat tatctaaata
1201 cttaaaaact tgaaatttaa atacgcttaa gaaacgacca gtctgaggct
1251 gtaaggtcgt ccagacttgg aagttgagaa aacatttgtg aatccccagt
1301 tccttccgga ggttgtggtt gaaccgtatc tggatcgata tgatgtcgtg
1351 gttcgtgtgg aacggtctgc tgtcgtggtt gataatcttg aaatagaggg
1401 gatttgttat ctcccaaata tagacgccat tctgggcctg atgagcagtg
1451 atgagttccc cggtgcgtaa atccatggtt gctgcagtcg atgtggaggt
1501 aatatgtaca cccgcaatca agatcaactc gcctacgcct gactactctc
1551 ttcttggcta ttcgatgctg gaccttgatt gggacttgag tacagtggct
1601 ggttgagggt gatgaagacc gcattcttta tagtccaagc cttcagggat
1651 gtattcttat cctcatcgag atattcttta tatgaggatg ttgggcctgg
1701 attgcagagg aagatagtgg gaatgccgcc tttaatttga attggtttcc
1751 cgtacttcgt gttgctttgc cagtcccttt gggccccaaa gaattccttc
1801 cagtgcttta ggtaatgcgg atctacgtca tcaatgacgt tataccaagc
1851 gtcattagaa tatacctttg gacttaagtc taaatgacca cataagtaat
1901 tatgttgccc taatgatcta gcccaaatag ttttgccgga acgactatcg
1951 ccctctatta caatactatt gggtctccaa ggccgcgcag cggcaccaca
2001 cacattctca gagacccact cttcaagttc ctcagggact tgatcaaaag
2051 aagatgaaga aaaaggagaa atataaggct ctgggggagc ctggaaaatc
2101 ctatctaaat tagtctttaa attatgatac tgaaaaataa aatctttagg
2151 gagtttttcc ctaataatag ccatagcggc ttcagcggaa cctgcgttta
2201 aagcgtcggc gcatgcgtcg ttagcatttt ggcagcctcc tctagcactt
2251 ctgccgtcga cctggaattc tccccattca agtgtgtctc catccttgtc
2301 gatgtaggac ttgacgtcgg agctggattt agctccctga atgtttggat
2351 ggaaatgtgc tgacctgttt ggggatacca ggtcgaagaa tcggtgattc
2401 ttgcagttga attttctctc gaactgaata agcacgtgga gatgaggttc
2451 cccattttcg tgtagctctc tgcagatttt gatgtatttt ttattggtgg
2501 gtgtttcaag gtttaataat tgggagagtg actcttcctt tgtgagagag
2551 cattttggat atgtgacgaa atagtttttg gaatttattt gaaagcgctt
2601 cggaggagcc atttggtcaa tgggtaccga ttgactctca aattgcattc
2651 tcctggtata tcggtaccca atatatagtg ggtactgaat ggcacaattg
2701 taatttgtgt gaaattaatt ggtatttcaa aattcaaact cccaaagcgg
2751 ccatccgatt aatatt