Sequence of DPV Tomato yellow leaf curl Malaga virus
Tomato yellow leaf curl Malaga virus isolate ES42199, complete genome.
ACC No: AF271234
Dated: 2005-04-15 | Length: 2782 | CRC: -573378723
!!NA_SEQUENCE 1.0
ID AF271234 standard; circular genomic DNA; VRL; 2782 BP.
XX
AC AF271234;
XX
SV AF271234.1
XX
DT 28-DEC-2001 (Rel. 70, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE Tomato yellow leaf curl Malaga virus isolate ES42199, complete genome.
XX
KW .
XX
OS Tomato yellow leaf curl Malaga virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2782
RX DOI; 10.1006/viro.2002.1633.
RX MEDLINE; 22379411.
RX PUBMED; 12490393.
RA Monci F., Sanchez-Campos S., Navas-Castillo J., Moriones E.;
RT "A natural recombinant between the geminiviruses Tomato yellow leaf curl
RT Sardinia virus and Tomato yellow leaf curl virus exhibits a novel
RT pathogenic phenotype and is becoming prevalent in Spanish populations";
RL Virology 303(2):317-326(2002).
XX
RN [2]
RP 1-2782
RA Monci F., Sanchez-Campos S., Navas-Castillo J., Moriones E.;
RT ;
RL Submitted (22-MAY-2000) to the EMBL/GenBank/DDBJ databases.
RL Estacion Experimental La Mayora, CSIC, Algarrobo-Costa, Malaga 29750, Spain
XX
FH Key Location/Qualifiers
FH
FT source 1. .2782
FT /country="Spain"
FT /db_xref="taxon:219744"
FT /mol_type="genomic DNA"
FT /note="TYLCV-Sar / TYLCV-Is recombinant"
FT /organism="Tomato yellow leaf curl Malaga virus"
FT /isolate="ES42199"
FT CDS 149. .496
FT /codon_start=1
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProt/TrEMBL:Q8V6I2"
FT /gene="V1"
FT /product="precoat protein V1"
FT /protein_id="AAL50344.1"
FT /translation="MWDPLLNEFPDSVHGLRCMLAIKYLQLVEETYEPNTLGHDLIRDL
FT ISVIRARDYAEANRRYTNFNARFEGSSKTELRQPVYQPCCCPHCPRHQASIMDLQAHVS
FT KAADVQNVQKP"
FT CDS 309. .1082
FT /codon_start=1
FT /db_xref="GOA:Q8V6I1"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8V6I1"
FT /gene="V2"
FT /product="coat protein V2"
FT /protein_id="AAL50345.1"
FT /translation="MPKRTGDILISTPVSKVRRKLNFDSPYTSRAAAPTVQGIKRRSWT
FT YRPMYRKPRMYRMYRSPDVPFGCEGPCKVQSYEQRDDVKHTGVVRCVSDVTRGSGITHR
FT VGKRFCIKSIYILGKIWMDENIKKQNHTNQVIFFLVRDRRPYGTSPMDFGQVFNMFDNE
FT PSTATVKNDLRDRYQVMRKFHATVVGGPSGMKEQCLLKRFFKVNTHVVYNHQEQAKYEN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN"
FT CDS complement(1079. .1483)
FT /codon_start=1
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProt/TrEMBL:Q8V6I0"
FT /gene="C3"
FT /product="C3 protein"
FT /protein_id="AAL50348.1"
FT /translation="MDSRTGELITAPQAENGVFIWEINNPLYFKITEHSQRPFLMNHDI
FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRHQVLKYLDSIGVISINN
FT VIRAVDHVLYDVLENTINVIEQHEIKYNLY"
FT CDS complement(1224. .1631)
FT /codon_start=1
FT /db_xref="GOA:Q8V6H9"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProt/TrEMBL:Q8V6H9"
FT /gene="C2"
FT /product="C2 protein"
FT /protein_id="AAL50347.1"
FT /translation="MQPSSPSTSHCSQVSIKVQHKIAKKKPIRRKRIDLDCGCSYYLHL
FT NCNNHGFTHRGTHHCSSGREWRFYLGDKQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ
FT HQEGIGDSQMFSQLPHLDDITASDWSFLKSI"
FT CDS complement(1540. .2619)
FT /codon_start=1
FT /db_xref="GOA:Q9YUX7"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q9YUX7"
FT /gene="C1"
FT /product="replication associated protein C1"
FT /protein_id="AAL50346.1"
FT /translation="MAPPKRFQINCKNYFLTYPKCSLTKEEALSQLKNLETPTNKKYIK
FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYV
FT DKDGDTVDWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALRIIKELIPKDYILQFH
FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPDELEVWVSENVVSSAARPWRPNSIVIEGD
FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYREYLDEEKNISLKNWALKNATFVTLYEPL
FT FASINQGPTQDSQEETNKA"
FT CDS complement(2160. .2462)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8V6H8"
FT /gene="C4"
FT /product="C4 protein"
FT /protein_id="AAL50349.1"
FT /translation="MGNHISMCLSNLKGNSSAKISDSSTWYPQAGQHISIQTFRELNPV
FT QMSSLMSIRTETPSTGVSFRSTDDLHVGVSSQPMTLTPQLLTQAVSQRLLESLKN"
XX
SQ Sequence 2782 BP; 767 A; 524 C; 616 G; 875 T; 0 other;
AF271234 Length: 2782 April 19, 2005 08:53 Type: N Check: 3726 ..
1 taatattacc ggatggccgc gctccccgat aaagtagtgg gccctacgca
51 gtaatttgtg tcgaccaatg aaaatgcagc ctcaaagctt aaataatgta
101 tttactttgt tataaacttg gcttctaagt tttgaaaaaa ccatcaatat
151 gtgggatcct ttattaaatg aatttccaga ttcagttcat ggtctccgtt
201 gtatgcttgc aataaaatat ttgcagctag ttgaagaaac ctatgaaccc
251 aatactctgg gtcatgatct aattagggat ctcatttccg tcattcgtgc
301 tcgtgactat gccgaagcga acaggcgata tactaatttc aacgcccgtt
351 tcgaaggttc gtcgaaaact gaacttcgac agcccgtata ccagccgtgc
401 tgctgccccc actgtccaag gcatcaagcg tcgatcatgg acttacaggc
451 ccatgtatcg aaagccgcgg atgtacagaa tgtacagaag ccctgatgtc
501 ccctttggtt gtgaaggtcc ttgtaaagtc cagtcgtatg agcagcgtga
551 cgacgtcaag cataccggtg ttgttcgttg tgttagtgat gtaactaggg
601 gttctggtat tacacataga gtaggtaaac ggttttgtat taagtcaatc
651 tatattttag ggaagatttg gatggatgaa aatataaaaa aacaaaatca
701 tactaaccag gtcatattct ttttagtacg agaccgaagg ccgtatggaa
751 ctagtcctat ggattttggt caagttttta acatgtttga taatgaacct
801 agtacggcta ctgtgaagaa cgatttaagg gataggtacc aagtaatgag
851 gaagttccat gccacggtgg taggtggtcc gtcagggatg aaggagcagt
901 gtctgttgaa gaggtttttt aaagttaata cccatgtagt ttataatcat
951 caagagcagg cgaagtatga aaaccatact gagaatgcgt tgttgttgta
1001 tatggcatgt actcatgctt ctaacccagt gtatgctacg ttgaaaatac
1051 gtatctattt ttatgatgct gtaacaaatt aataaagatt gtattttatt
1101 tcatgttgtt caattacatt tattgtgttt tcaagtacat catacaatac
1151 atgatcaact gctctgatta cattgttaat tgaaattaca ccaatactat
1201 ctaaatactt aagaacttga tgtctaaata ctcttaagaa acgaccagtc
1251 tgaggctgta atgtcgtcca gatgcggaag ttgagaaaac atttgtgaat
1301 ccccaatacc ttcctgatgt tgtggttgaa tcttatctga atggaaatga
1351 tgtcgtggtt cattagaaat ggcctctggc tgtgttctgt tatcttgaaa
1401 tagaggggat tgtttatctc ccagataaaa acgccattct ctgcctgagg
1451 agcagtgatg agttcccctg tgcgtgaatc catgattgtt gcagttgagg
1501 tggaggtagt atgagcagcc acagtctagg tctatacgct tacgccttat
1551 tggtttcttc ttggctatct tgtgttggac cttgattgat acttgcgaac
1601 agtggctcgt agagggtgac gaaggttgca ttcttgagag cccaattttt
1651 caaggatatg tttttttctt cgtctagata ttccctatat gaggaggtag
1701 gtcctggatt gcagaggaag atagtgggaa ttcccccttt aatttgaatg
1751 ggcttcccgt actttgtgtt gctttgccag tccctctggg cccccatgaa
1801 ttccttgaag tgctttaaat aatgcgggtc tacgtcatca atgacgttgt
1851 accatgcatc attactgtat acctttgggc ttaggtctag atgtccacat
1901 aaataattat gtgggcctag agacctggcc cacattgttt tgcctgttct
1951 gctatcaccc tcaatgacaa tactattagg tctccatggc cgcgcagcgg
2001 aagacacgac gttctcggac acccatactt caagttcatc tggaacttga
2051 ttaaaagatg aagataaaaa gggagaaata taaggagccg gaggctcctg
2101 aaaaattcta tctaaattac tatttaaatt atgaaattgt aaaatataat
2151 ctttcggtat taattcttta atgattctaa gagcctctga cttactgcct
2201 gagttaagag ctgcggcgta agcgtcattg gctgactgct gacccccacg
2251 tgcagatcgt ccgtcgatct gaaactcacc ccagtcgacg gtgtctccgt
2301 ccttatcgac ataagacttg acatctgaac tggatttagc tccctgaatg
2351 tttggatgga aatgtgctgc cctgcttggg gataccaggt cgaagaatcg
2401 ctgattttgg cacttgaatt tcccttcaaa ttggataagc acatggagat
2451 gtggttcccc attctcgtgg agttctctgc aaactttgat gtatttttta
2501 tttgttgggg tttctaggtt ttttaactgg gaaagtgctt cttctttcgt
2551 taaggagcac ttaggatatg tgaggaaata atttttgcaa tttatttgga
2601 agcgcttagg gggagccata tggtcaatga gtaccgattg accaagattt
2651 ttacacttat ccctggtgta tcggtactca atatatagtg agtaccaaat
2701 ggcatattgg taattttgta aaagtacaat gcaattcaaa attcaaaatt
2751 caaaaatcaa atcattaaag cggccatccg ta