Sequence of DPV Rice grassy stunt virus
Rice grassy stunt virus segment RNA5 NS5 and coat protein genes, complete cds.
ACC No: AF290947
Dated: 2003-05-29 | Length: 2702 | CRC: 2117954516
!!NA_SEQUENCE 1.0
ID AF290947 standard; genomic RNA; VRL; 2702 BP.
XX
AC AF290947;
XX
SV AF290947.1
XX
DT 24-AUG-2000 (Rel. 64, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Rice grassy stunt virus segment RNA5 NS5 and coat protein genes, complete
DE cds.
XX
KW .
XX
OS Rice grassy stunt virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2702
RA Zhang C., Wu Z., Lin Q., Xie L.;
RT "Rice grassy stunt virus genomic RNA5 for nucleocapsid protein and## 21.6K
RT protein, complete cds";
RL Unpublished.
XX
RN [2]
RP 1-2702
RA Zhang C., Wu Z., Lin Q., Xie L.;
RT ;
RL Submitted (28-JUL-2000) to the EMBL/GenBank/DDBJ databases.
RL Department of Plant Protection, Institute of Plant Virology, Fujian
RL Agricultural University, Fuzhou, Fujian 350002, P.R.China
XX
DR GOA; Q9ELT0.
DR SPTREMBL; O36169; O36169.
DR SPTREMBL; Q9ELT0; Q9ELT0.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2702
FT /db_xref="taxon:66266"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Rice grassy stunt virus"
FT /isolate="Shaxian"
FT /segment="RNA5"
FT CDS 104. .679
FT /codon_start=1
FT /db_xref="SPTREMBL:O36169"
FT /note="21.6 kd protein"
FT /product="NS5"
FT /protein_id="AAG01864.1"
FT /translation="MSGMNSEEYMVLNTMLQTVGCDAHELLKKTPGCEKAVYLFCCKST
FT MIRELVTVIRSIDENTINGQLLYSVCRELLKLMYLEDGSENIAIIKPLLLLLTEKNKIV
FT NKVSTKNCWICSLYKRELAEGSPLVVTKSKTEVKHFADSVNVGFVTVQHGSELPDLPMT
FT IYKPVKEQKHQYGFLSDSELITADYVRV"
FT CDS complement(1557. .2534)
FT /codon_start=1
FT /db_xref="GOA:Q9ELT0"
FT /db_xref="SPTREMBL:Q9ELT0"
FT /note="nucleocapsid protein"
FT /product="coat protein"
FT /protein_id="AAG01865.1"
FT /translation="MGKVQFGDGHWANNKEWSDLLSEIFSKIRASIDGFANATADLAAG
FT LEYQAFNPEKILRKLIASSTSLDDFVKDMRDLLVARYTRGTSFLFNAKNSIEKAKDKKK
FT AEAIQVLINRYGVKKNAGDNAVDQATLGRISQVLAYMALRVALQITDYHKPIIPLRPIS
FT TVDIKNAIIDVVPQFLYLKADQLDSKTNSEAALYVIHLCYQVCVSERIMTKAQKDKHSV
FT HTKSAMITHCMGFVNLAMDNSSVVSDDKIAGRRMISGPWGLQETALDATGCACIIDVVD
FT FCCRGHKVTDAVAPVRLFRLAIECIKDTADLKDAGVKLKTLVDK"
XX
SQ Sequence 2702 BP; 884 A; 516 C; 433 G; 869 T; 0 other;
AF290947 Length: 2702 January 7, 2004 15:42 Type: N Check: 1614 ..
1 acacaaagtc ctgggcaatt atagcaaaac aacaccttct ttaagcactc
51 agctttcctt taaaccacat tacttcagaa ttctctagca cattgatcgt
101 tatatgtctg gcatgaattc agaagagtac atggtgctca acaccatgct
151 tcaaacagta gggtgtgatg cacacgaact actgaaaaaa actccaggtt
201 gtgagaaggc tgtgtattta ttctgttgta agtctactat gatacgtgaa
251 ttagtgactg tgatcaggag tattgatgaa aacaccatca acggtcaatt
301 gctatattct gtttgcagag agctgctaaa actgatgtat ctggaagatg
351 gctctgagaa catagcaata atcaaaccat tgctactgtt actcactgag
401 aaaaataaga tagtgaacaa ggtctccaca aagaactgct ggatctgtag
451 cttatacaaa agagagttgg cggaagggtc ccctctagtt gttactaaga
501 gtaagactga agtgaaacac ttcgcggact cagtgaatgt tggttttgtc
551 actgttcaac atggttcaga gttaccagac ttgcctatga caatatataa
601 gccagttaaa gaacagaagc accaatatgg gtttctgtct gactctgagc
651 taatcactgc agattacgtt agagtctagt gattggacta aaattgagtg
701 tattagtaaa gtattatatt ttcttgtctt tgaactctca gtcaaaagag
751 tttgagacta atgaacttca taatacactt gatgtggatg aaaaaaacac
801 aaaaaaacaa aaaagaaaaa aagaagaaaa aaagaaaaaa accaaaaaaa
851 tagaaacaaa taaagaaaca ataacatagg taagtagtaa ataagcaaca
901 ccagcttcgg ctggtatcca tcaatcaatg attttggaga caaatcagtg
951 atcatgactt caaaattgtc cagattaaca tttaaggttt ctgttcttct
1001 gtcttcccaa ctaatgttca ttaatgagtt tgaagttgta gatttactta
1051 cattttctga tttgaatgag aatttgtact gggataacag ccgaagctgt
1101 ttttgttttt ttgatttttt tgtttttctg tgtttttttg gtgtttttat
1151 gttttccata ttttgtgatt tttttgcttt tattattatt aacatctaga
1201 cacttttagc ttcgttaccc accctatgat gattataata tattaagact
1251 tactcctact ttaagtgacc ataattgtac atacatatta actaacacca
1301 tactacaaat gcatataaga acatattaac tactcacact aatgacctta
1351 caatggacta ctacaactaa gtacagtata taatgagtat ataatcctat
1401 aacctccatt aatgctagat tactattact atttattatt atttgtttat
1451 aacataaacc taacacccaa ctcccattgc tatgtaattt actaatttat
1501 attatattat atgattcaca ctatacacta cgctaaaggc taatgtagaa
1551 aatgaatcac ttatcaacca gagtcttcaa tttaactcca gcatccttca
1601 gatcagctgt atcttttatg cactcaatag ctaatctgaa cagcctaact
1651 ggcgccacag catctgttac tttgtgtccc ctgcagcaga aatcaacaac
1701 atcaatgata catgcgcagc ctgtggcatc tagagcagtt tcctgtagtc
1751 cccacggacc tgagatcatc cttctaccag ctatcttatc atcagacact
1801 actgaagaat tatccatagc caggttgaca aaacccatgc agtgtgttat
1851 cattgctgac ttagtgtgga cactgtgctt atccttctga gctttagtca
1901 tgattctttc agacacacag acttggtaac acaaatggat tacatacaga
1951 gctgcctctg agttggtctt tgaatcaagt tgatctgctt taagatataa
2001 aaattgtgga acaacatcaa tgatagcatt cttaatatca acggtactaa
2051 tgggtctcaa tggtatgatt ggcttatgat agtctgtgat ttgtaaagca
2101 actctcaatg ccatatatgc cagcacttga cttattcttc ccaaagtggc
2151 ttgatcaaca gcattgtctc cagcattctt ttttactccg tacctattta
2201 tcagtacctg aatagcttct gccttcttct tatccttagc tttctcaatt
2251 gagtttttag cattgaacaa gaagctagtt cctctggtgt acctggccac
2301 caagaggtca cgcatatcct taacaaagtc atccaatgaa gttgaggatg
2351 caatcaactt cctcaaaatc ttttcaggat tgaaagcctg atactccaat
2401 cctgcagcca aatcagctgt agcattggca aatccatcta tagatgctct
2451 gatttttgaa aatatttctg acaacaaatc agaccattcc ttgttatttg
2501 cccagtgacc atctccaaat tgcactttac ccatcttaca ctattatttt
2551 tactaaaaca aaactgattt gttatattat ataataggaa tatataaaaa
2601 ccaatatatt agataataat aaaatactta aagtacacaa aaagggtttt
2651 cttaatgtat gatgaatgtt aactttcttc aaaagatgcc cagactttgt
2701 gt