Sequence of DPV Oat mosaic virus

Oat mosaic virus polyprotein gene, partial cds.

ACC No: AF318181

Dated: 2002-01-11 | Length: 1441 | CRC: -729219480

                !!NA_SEQUENCE 1.0
ID   AF318181   standard; RNA; VRL; 1441 BP.
XX
AC   AF318181;
XX
SV   AF318181.1
XX
DT   15-MAY-2001 (Rel. 67, Created)
DT   11-JAN-2002 (Rel. 70, Last updated, Version 2)
XX
DE   Oat mosaic virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Oat mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-1441
RA   Monger W.A., Clover G.R.G., Foster G.D.;
RT   "Molecular characterization of oat mosaic virus";
RL   Eur. J. Plant Pathol. 107:661-666(2001).
XX
RN   [2]
RP   1-1441
RA   Clover G.R.G.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Plant Health, Central Science Laboratory, Sand Hutton, York, North
RL   Yorkshire YO41 1LZ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1441
FT                   /country="France: Preaux, Indre"
FT                   /db_xref="taxon:157837"
FT                   /organism="Oat mosaic virus"
FT   CDS             <1. .1090
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /protein_id="AAK52667.1"
FT                   /translation="LTMVRTPFGIGFSLPVERIISILQWAKRGGVLHSYLAGIAAAIES
FT                   FNTPKLFKSIFSYLIWLTETHRDELLASMTSTANALPIPSMLDIYQLHYGESNIVLQAS
FT                   TGEKAKTGDLTATAPAPFVTHPDDEDEGKITRGPGQALTEVGKTWSMPKVTLKHSGPKF
FT                   KIPLNKLATIPISALEHNNSIANESERKAWEDGVRTDLGITDDDKWYNTLIPFLGWCVN
FT                   NGTSDKHKESQIMQIDNGTGSMSEVALSPFIIHGRINGGLRRIMRNYSDETVFLIGSKR
FT                   VKMSMKFSMKHGSHVNPAYSFDFFVPRPWMNTQDIEISKQVRLAALGTGTYNSMLTSDT
FT                   ANLRKTTHHRVLDSDGHPELTP"
FT   mat_peptide     <1. .307
FT                   /product="nuclear inclusion protein b"
FT   mat_peptide     308. .1087
FT                   /product="capsid protein"
FT   3'UTR           1091. .1441
XX
SQ   Sequence 1441 BP; 395 A; 363 C; 312 G; 371 T; 0 other;

AF318181  Length: 1441  January 22, 2002 15:33  Type: N  Check: 9288  ..

       1  cctgaccatg gtacgaaccc cttttggaat tggtttctcg ctccctgttg
      51  agagaatcat ttccatactg cagtgggcta agaggggcgg cgttctccat
     101  tcatatttgg ccggcatcgc cgctgctatt gaatcgttca acacgcccaa
     151  acttttcaaa tccattttct cgtacctcat ctggctcaca gagacacacc
     201  gcgatgagct acttgcttcg atgacttcca ctgcaaacgc tttgccaata
     251  ccatcaatgc ttgatatata tcaactgcat tatggagaaa gcaacatcgt
     301  tctgcaagca tcaactggcg agaaggctaa aacgggtgat ctcactgcaa
     351  cagcgcctgc accttttgtc actcatcccg atgatgagga tgaagggaaa
     401  ataactagag gaccaggcca ggcattgact gaggttggca aaacctggtc
     451  catgccaaag gtgactctga aacactctgg tcccaaattc aaaattcctc
     501  tcaacaaatt ggccactata ccaataagcg cccttgaaca taacaattct
     551  atagccaatg agtctgagag gaaagcatgg gaagatggcg ttagaaccga
     601  tcttggaatc actgatgatg acaagtggta caacactctg atccccttcc
     651  tcggatggtg cgtcaacaat ggcacttccg acaagcacaa agaaagccaa
     701  ataatgcaaa tagacaatgg aacaggatca atgtctgaag ttgcactatc
     751  cccatttatt atacatggaa gaataaatgg agggctccga agaataatga
     801  gaaattatag cgatgagacg gttttcctca tcgggagcaa aagagtaaaa
     851  atgtcgatga aattttcgat gaaacacgga tcccatgtca accctgcata
     901  ttcgtttgat ttctttgtcc ctcgtccttg gatgaacaca caggatattg
     951  agatctcaaa gcaggtccgt cttgcagcac ttggaactgg cacgtataac
    1001  agcatgttaa cgtccgacac tgccaatttg cgcaaaacaa cccaccacag
    1051  ggttctggat tctgatggac atccagagct tacaccttaa gccatcaccc
    1101  ctcgctctat agccaccata accgcctatt taacgcaccc cattgtcacc
    1151  ccacgcaatg tcctggttcg tatcaatgct ggtgccacgg tttcaccccc
    1201  ttcttaaggg aggctgctgc acccacgttg gttttacttt tctgcaaggt
    1251  tctggttcgc gctgtagtgc ttggaacggt tctattcgct atacgtcatg
    1301  ctgctcacga aaccagttta tggttttgct aacagcttga cggttgccta
    1351  tccatctggc taggctaggg aagccgtttt aaccatccgt cgttggatgg
    1401  tggtgtgttg caatacacat ttacgagtac cagtaggtaa t