Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate SpT-27 coat protein (CP) gene, partial cds.

ACC No: AF319502

Dated: 2001-02-12 | Length: 1058 | CRC: -116090925

                !!NA_SEQUENCE 1.0
ID   AF319502   standard; RNA; VRL; 1058 BP.
XX
AC   AF319502;
XX
SV   AF319502.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate SpT-27 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1058
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1058
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C74; Q99C74.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1058
FT                   /country="Mexico"
FT                   /db_xref="taxon:12205"
FT                   /note="S.L. Potosi isolate"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="SpT-27"
FT   CDS             <1. .852
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C74"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06738.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKLKEKEKDDASDGNDVSTSTKTG
FT                   ERDRDVNVGTSGIFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQ
FT                   SQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVEYPIK
FT                   PLIEHATPSFRQIMAHFSNAAEAYITKRNAIERYMPRYGIKRNLTDISLARYAFDFYEV
FT                   NSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGM
FT                   RN"
XX
SQ   Sequence 1058 BP; 351 A; 187 C; 249 G; 271 T; 0 other;

AF319502  Length: 1058  December 21, 2001 15:31  Type: N  Check: 5944  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aagctcaaag aaaaagaaaa
      51  acagaaagaa aaagaaaaac taaaagagaa agaaaaagat gacgctagtg
     101  acggaaatga tgtgtcaact agcacaaaaa ctggagagag agatagagat
     151  gtcaatgttg gaaccagtgg aattttcact gttccgagaa ttaaatcatt
     201  taccgataag atgattttgc cgagaattaa aggaaagact gtccttaatt
     251  taaatcatct tcttcagtac aatccgcaac aaattgacat ttctaacact
     301  cgtgccactc aatcacaatt tgagaagtgg tatgagggag tgaggaatga
     351  ttatggcctt aatgataacg aaatgcaagt aatgctaaat ggcttgatgg
     401  tctggtgtat cgagaatggt acatctccag acatatctgg tgtctgggtt
     451  atgatggatg gggaaaccca agtagaatat ccaatcaagc ctttaattga
     501  gcatgcaacc ccgtcattta ggcaaattat ggctcacttt agtaacgcgg
     551  cagaagcata cataacaaag agaaatgcta ttgagagata catgccgcgg
     601  tatggaatca agagaaattt gactgacatt agcctcgcta gatacgcttt
     651  cgatttctat gaggtgaatt cgaaaacacc tgatagggct cgtgaagctc
     701  acatgcagat gaaagctgca gcgctgcgaa acactaatcg cagaatgttt
     751  ggcatggacg gcagtgttag taacaaggaa gaaaatacgg agagacacac
     801  agtggaagat gtcaacagag acatgcactc tctcctgggt atgcgcaact
     851  gaatactcgc gcttgtgtgt tcgtcgagtt taactcgaac ctatttcacc
     901  ttatagtact atataagcat tagaatacag tgtggctgtg ccaccgcttc
     951  taatttatag tgagggtagc cctccgtgct tttagtatta ttcgagttct
    1001  ctgagtctcc atacagtgtg ggtggcccac gtgatatttg agcctcttag
    1051  aatgagag