Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate TbC-43 coat protein (CP) gene, partial cds.

ACC No: AF319504

Dated: 2001-02-12 | Length: 1058 | CRC: -1332333515

                !!NA_SEQUENCE 1.0
ID   AF319504   standard; RNA; VRL; 1058 BP.
XX
AC   AF319504;
XX
SV   AF319504.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate TbC-43 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1058
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1058
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C72; Q99C72.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1058
FT                   /country="Mexico: Tabasco"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="TbC-43"
FT   CDS             <1. .852
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C72"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06740.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKQKEKEKDIASDGNDVSTSTKTG
FT                   EKDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQ
FT                   SQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGEIQVDYPIK
FT                   PLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEV
FT                   NSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGM
FT                   RN"
XX
SQ   Sequence 1058 BP; 339 A; 187 C; 256 G; 276 T; 0 other;

AF319504  Length: 1058  December 21, 2001 15:31  Type: N  Check: 551  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aaactcaaag aaaaagaaaa
      51  acagaaagaa aaagaaaaac aaaaagaaaa agaaaaagac attgctagtg
     101  acggaaatga tgtgtcgact agcacaaaaa ctggagagaa agatagagat
     151  gtcaatgtcg ggaccagtgg aactttcact gttccgagga ttaaatcatt
     201  cactgataag atgattctac cgagaattaa gggaaagact gtccttaatt
     251  taaatcatct tcttcagtat aatccgcaac aaattgacat ttctaacact
     301  cgtgccactc agtcacaatt tgagaaatgg tatgagggag tgaggaatga
     351  ttatggtctg aatgataatg agatgcaagt gatgctgaat ggcttgatgg
     401  tttggtgtat cgagaatggt acatctccag acatatctgg tgtttgggtt
     451  atgatggatg gggaaattca agttgactat ccaatcaagc ctttaattga
     501  gcatgctacc ccgtcattta ggcagattat ggctcacttt agtaacgcgg
     551  cagaagcata tattgcaaag agaaatgcca ctgagagata catgccgcgg
     601  tatggaatca agagaaattt gactgacatt agcctcgcta gatacgcttt
     651  cgatttctat gaggttaatt cgaaaacacc tgatagggct cgcgaagctc
     701  acatgcagat gaaagctgca gcgctgcgaa acactagtcg cagaatgttt
     751  ggtatggacg gcagtgttag taacaaggaa gaaaacacgg agagacacac
     801  agtggaagat gtcaatagag acatgcactc tctcctgggt atgcgcaact
     851  gaatactcgc gctggtgtgt ttgtcgagct cgactcgacc ctgtttcacc
     901  ttatagtact atataagcat tagaatacag tgtggctgtg ccaccacttc
     951  tattttaaag tgagggtagc cctccgtgct tttagtatta ttcgagttct
    1001  ctgagtctcc atacagtgtg ggtggcccac gtgttatttg agcctcttag
    1051  aatgagag