Sequence of DPV Melon chlorotic leaf curl virus
Melon chlorotic leaf curl virus-[Guatemala] nuclear shuttle protein (BV1) and movement protein (BC1) genes, complete cds.
ACC No: AF325498
Dated: 2011-06-07 | Length: 2638 | CRC: -2071789562
ID AF325498; SV 2; linear; genomic DNA; STD; VRL; 2638 BP.
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AC AF325498;
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DT 02-AUG-2001 (Rel. 68, Created)
DT 07-JUN-2011 (Rel. 109, Last updated, Version 6)
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DE Melon chlorotic leaf curl virus-[Guatemala] nuclear shuttle protein (BV1)
DE and movement protein (BC1) genes, complete cds.
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KW .
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OS Melon chlorotic leaf curl virus-[Guatemala]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2638
RA Brown J.K., Idris A.M., Rogan D., Hussein M.H., Palmieri M.;
RT "Melon chlorotic leaf curl virus, a new Begomovirus associated with Bemisia
RT tabaci infestations in Guatemala";
RL Plant Dis. 85:1027-1027(2001).
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RN [2]
RP 1-2638
RX PUBMED; 18057231.
RA Idris A.M., Mills-Lujan K., Martin K., Brown J.K.;
RT "Melon chlorotic leaf curl virus: characterization and differential
RT reassortment with closest relatives reveal adaptive virulence in the squash
RT leaf curl virus clade and host shifting by the host-restricted bean calico
RT mosaic virus";
RL J. Virol. 82(4):1959-1967(2008).
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RN [3]
RP 1-2638
RA Brown J.K., Idris A.M., Rogan D., Hussein M.H., Palmieri M.;
RT ;
RL Submitted (01-DEC-2000) to the INSDC.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
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RN [4]
RC Sequence update by submitter
RP 1-2638
RA Idris A.M.;
RT ;
RL Submitted (06-JUN-2011) to the INSDC.
RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
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CC On Jun 6, 2011 this sequence version replaced gi:15077412.
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FH Key Location/Qualifiers
FH
FT source 1. .2638
FT /organism="Melon chlorotic leaf curl virus-[Guatemala]"
FT /segment="B"
FT /mol_type="genomic DNA"
FT /country="Guatemala"
FT /db_xref="taxon:223286"
FT gene 530. .1300
FT /gene="BV1"
FT CDS 530. .1300
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="AEH16840.1"
FT /translation="MYSANYRRTRGTTQRGSYSRRPIFKRPHYLSRSDDKRRTNSTIVP
FT HADTKMLKQRLHEDQFGPDYVLCHNSAMSTFITLPSLGKHEPNRSRSFIKLQRLRYKGT
FT LKIERGPGDTFMEGPTSKVEGVFSMVVVVDRKPHVNPSGRLHSFDELFGARIHSHGNLA
FT IVPALKERFYIRHVLKRVLSVEKDTLMVDLHGTTALSNRRFNCWSSFNDLERDSCNGVY
FT ANINKNALLVYYCWMSDMPSKASTYVTFDLDYVG"
FT gene complement(1505. .2386)
FT /gene="BC1"
FT CDS complement(1505. .2386)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="AEH16841.1"
FT /translation="MGSQLAPPPNAFNYIESSRDEFQLSHDLTEIILQFPSTTSQLTAR
FT LSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWKLYYRVTDSNVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKILT
FT KQFSQKDVDFWHVGYGKWERRLVKSASMSRYGLRGPIELNPGESWATRSALGTSPLNAD
FT LDTTDEMLPYRELNRLGTSILDPGESASMVGIQRSQSNITMSMAQLNELVRSTVQECIK
FT TSCIPSTPKSLG"
FT rep_origin 2496. .>2638
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SQ Sequence 2638 BP; 718 A; 543 C; 552 G; 825 T; 0 other;
af325498 Length: 2638 07-JUN-2011 Type: N Check: 4858 ..
1 accggatggc cgcccttttt tggtgtcctc cactttattc ccgggcctgg
51 accatctgcg gtgtgcagga tgaaaggccc agcccatctt gacgtgcgcc
101 tttactcttt atgggaccac acagcacaaa caaccaatca tattcggagt
151 ttgtatcttg tatatctgct aattgtaaca caatggtgga cccatgtgaa
201 cattgtgctg tgtaagaaac ttcgtcttta attcaaattg ccaaagtggg
251 catctcgtct ttattttgaa catttaaaga aagctgtacg aatgtcagct
301 ttaacccatt acttcttcgc tcggtaccgc atattaataa tttgaattat
351 actttattgt ggccaattac atttcaacta cgtgtcttgt tagatgatca
401 ggaccacgtt atttgtctat ttatatgtgc ttcgtgtaat tggcctccac
451 gtcgtataca tgctttagcc acattgttta gtttatacac gattgatatc
501 gggtatagta tttaatttac ctgttcgtta tgtattcggc gaactataga
551 cgtactcgtg ggactaccca acgtggttca tattcacgac gtccaatatt
601 caagcgtcca cattatttgt ctcggtcaga tgataagcgt cgcactaatt
651 cgactattgt gcctcatgcc gacactaaga tgttaaaaca acggttgcat
701 gaggatcaat ttggcccaga ttatgttttg tgtcataata gtgcgatgtc
751 cacgtttatt actcttccta gtcttggtaa gcacgagccc aatcgttcaa
801 ggtcgtttat aaagttacaa cgactccgtt acaagggaac tctgaaaatt
851 gaacgtggac ctggtgacac gttcatggaa ggtcccacgt caaaggtaga
901 aggcgtcttt tctatggtag ttgtggttga tcgtaaacca catgttaacc
951 catctggacg cttacattcc tttgatgagt tattcggcgc gcgtatccat
1001 agtcacggta atttagccat agtcccggca ttgaaggagc gtttttacat
1051 tcgccacgta ttgaaacgag tattatccgt cgagaaagac acgttgatgg
1101 ttgatctaca tggaacaacc gcattatcta ataggcgatt caattgttgg
1151 tcctcgttta atgatcttga acgcgattca tgtaacggcg tttacgctaa
1201 tataaacaag aacgctcttt tagtttatta ttgttggatg tcggatatgc
1251 cttcgaaggc atcgacatat gtaacgtttg atctcgacta tgtcggataa
1301 ataggaatat tttattgatc aaatatgttg cctaccgcca tatattacaa
1351 acaataatct tttacccaga tcttttaatt aaacccgtag tttaattatc
1401 ctattaaata tggccacgca gtggaacact ctccaaaatg aagaacagca
1451 atattttcat taaccaatta tcgtcatgat gtgacaataa acctaaatac
1501 aatattatcc taaggatttt ggagttgagg gaatacaact ggtcttgatg
1551 cactcctgaa cggtggatct aactaattcg ttcagttgtg ccattgacat
1601 ggtaatgttt gattgcgacc gttgtattcc gaccattgac gccgattctc
1651 cagggtctaa tatagatgta cccaacctgt taagctcgcg atagggaagc
1701 atctcatctg ttgtatccaa gtccgcattt agtgggctcg tacccagagc
1751 acttctagtg gcccaagatt cgcctggatt taattcaatt gggcctctga
1801 gcccatatct tgacatcgat gcggatttga ccagtcttct ctcccatttg
1851 ccgtacccaa cgtgccagaa atcgacgtcc ttttggctaa attgctttgt
1901 aaggattttg actgttggtg cccggaaggg aatatcgacg gaatgtttcg
1951 ccgacgataa cttcaattta cctttgaatt tagcgaaatg agtcatctga
2001 tgcacgttcg agtctgttac ccgataatat aacttccaag gaatgggatc
2051 tttgagagag aagaatgatg acgagaaata gtggagatct atgttacatc
2101 tgatcggaaa cgtccacgag gcttgtaagg actcattgtc ggtcattcgt
2151 ttatcgtgaa tctccactat tactgttcca gatgcgttga taggtacttg
2201 ttgcctatat tctatgacac aatggtcgat cttcatacaa ctccgactaa
2251 gtcttgcagt taattgggaa gtagtcgacg gaaattgcag aataatttcc
2301 gttaagtcgt gcgataactg aaattcatcc cgactagact ctatataatt
2351 gaacgcattc ggtggaggag ctaattgaga acccatttag agaaacacaa
2401 atcttgtcat gctaattcgg aaacggacac tgcgtataaa taataattca
2451 tgactcggat atgaggaacg aagtttgtta gggtttcaat ggcatatttt
2501 gtagatatga ttcgggacac caggaggagc tctctctaaa acctatattt
2551 gtggtgtcct ggtgtcctat atatactaca aggcttctag gaggctacta
2601 ggacaccagg ggtaaattcg gccatccgca ataatatt