Sequence of DPV Tobacco leaf curl Zimbabwe virus
Tobacco leaf curl virus isolate HG from Zimbabwe C4 gene, complete cds.
ACC No: AF368275
Dated: 2006-11-14 | Length: 1341 | CRC: -2099807415
ID AF368275; SV 1; linear; genomic DNA; STD; VRL; 1341 BP.
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AC AF368275;
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DT 14-NOV-2001 (Rel. 69, Created)
DT 14-NOV-2006 (Rel. 89, Last updated, Version 3)
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DE Tobacco leaf curl virus isolate HG from Zimbabwe C4 gene, complete cds.
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KW .
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OS Tobacco leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-1341
RX PUBMED; 11714987.
RA Paximadis M., Rey M.E.;
RT "Genome organization of Tobacco leaf curl Zimbabwe virus, a new, distinct
RT monopartite begomovirus associated with subgenomic defective DNA
RT molecules";
RL J. Gen. Virol. 82(Pt 12):3091-3097(2001).
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RN [2]
RP 1-1341
RA Paximadis M., Rey C.;
RT ;
RL Submitted (05-APR-2001) to the EMBL/GenBank/DDBJ databases.
RL Molecular and Cell Biology, University of the Witwatersrand, 1 Jan Smuts
RL Avenue, Johannesburg, Gauteng P.O. Wits 2050, South Africa
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FH Key Location/Qualifiers
FH
FT source 1. .1341
FT /organism="Tobacco leaf curl virus"
FT /isolate="HG"
FT /mol_type="genomic DNA"
FT /country="Zimbabwe"
FT /note="subgenomic"
FT /db_xref="taxon:67762"
FT misc_difference 332. .503
FT /replace=""
FT /note="compared to sequence deposited with GenBank
FT Accession Number AF350330"
FT CDS complement(774. .1031)
FT /codon_start=1
FT /product="C4"
FT /note="similar to Tobacco leaf curl virus C4 sequence
FT encoded by GenBank Accession Number AF350330"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:Q910W5"
FT /inference="non-experimental evidence, no additional
FT details recorded"
FT /protein_id="AAL30459.1"
FT /translation="MGNLISTCLFSSRENSTARITDSSTWYPQPGQHISIQTFRELNQA
FT PTSSPTSTRMETHLNGENSRSTDEVLEEAARMLTTHAPTL"
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SQ Sequence 1341 BP; 358 A; 257 C; 307 G; 419 T; 0 other;
af368275 Length: 1341 14-NOV-2006 Type: N Check: 5252 ..
1 accggatggc cgcgccccgg aaaagaagtg ggccccacat ttgataatga
51 tgtgccgacc aatcatatcg tagcctgaaa ggctagatat ttgttctttg
101 tctttatata cttgctcgtc aattatgggc cttgtccatc atgtgggatc
151 ctctattgaa tgagtttccc gaatctgttc acggatttcg ttgtatgctg
201 gccatcaaat atttgcaggc cgttgaggaa agttacgagc ccaatacttt
251 gggccacgat ttaattaggg atcttatttg tgttattagg gctcgagact
301 atgtcgaagc gaccaggcga tataatcatt taaaccgaga cacgtaatcg
351 tatgatattg ctatttgcat aagtcaattt atagaggaaa gtatttggta
401 tctttaaatt gtaaggtaat tacttatcca cgtaaatgaa ttgaattcca
451 tatgaagtgc ctgtctatta atatggagtt ggaccagtca gtaaatgctt
501 tcttagtttt gccggtacga ctatcgcctt ctattacaat actattgggc
551 ctccaaggcc gcgcagcggc accacacaca ttctcagaga cccacccttc
601 aagttcctca gggacttgat caaaagaaga agaagagaaa ggagaaatat
651 aaggctctgg gggagcctgg aaaatcctat ctaaattagt ctttaaatta
701 tgatactgaa aaataaaatc tttagggagt ttttccctaa taatagccat
751 agctgcttca gcggaacctg cgtttaaagc gtcggcgcat gcgtcgttag
801 cattctggca gcctcctcta gcacttcgtc cgtcgacctg gaattctccc
851 cattcaagtg tgtctccatc cttgtcgatg taggacttga cgtcggagct
901 tgatttagct ccctgaatgt ttggatggaa atgtgctgac ctggttgggg
951 ataccaggtc gaagaatcgg tgattcttgc agttgaattt tccctcgaac
1001 tgaataagca cgtggagatg aggttcccca ttttcgtgta gctctctgca
1051 gattttgatg tattttttat tggtgggtgt ttcaaggttt aataattggg
1101 agagtgtctc ttcctttgtg agagagcatt ttggataagt gacgaaatag
1151 tttttggaat ttatttgaaa gcgtttcgga ggagccattt ggtcaatggg
1201 taccgattga ctctcaaatt gcattctcct ggtatatcgg tacccaatat
1251 atagtgggta ccgaatggca caaatgtaat ttggggaaag taatttaaaa
1301 ttcaaatttt aaacgcttaa agcggccatc cgattaatat t