Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus from Stamariaara Noel coat protein mRNA, complete cds.

ACC No: AF405718

Dated: 2005-04-15 | Length: 672 | CRC: -1310224875

                !!NA_SEQUENCE 1.0
ID   AF405718   standard; mRNA; VRL; 672 BP.
XX
AC   AF405718;
XX
SV   AF405718.1
XX
DT   31-DEC-2004 (Rel. 82, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus from Stamariaara Noel coat protein mRNA, complete
DE   cds.
XX
KW   .
XX
OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   "Variability in the coat protein gene of Cymbidium mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   ;
RL   Submitted (06-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, National University of Singapore, Block S2, 14 Science
RL   Drive 4 117543, Singapore
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /country="Singapore"
FT                   /db_xref="taxon:12178"
FT                   /mol_type="mRNA"
FT                   /organism="Cymbidium mosaic virus"
FT                   /specific_host="Stamariaara Noel"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5K6D0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProt/TrEMBL:Q5K6D0"
FT                   /note="viral encapsulation and long distance movement"
FT                   /product="coat protein"
FT                   /protein_id="AAQ03195.1"
FT                   /translation="MGEPTPTPAATYSAADPTSSPKLADLTAIKYSPVTSSIATPEEIK
FT                   AITQLWVNTLGLPADTVGTAAIDLARAYADVGASKSATLLGVCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLGSTNTLYALPAPPT
FT                   E"
XX
SQ   Sequence 672 BP; 134 A; 240 C; 154 G; 144 T; 0 other;

 AF405718  Length: 672  April 19, 2005 08:51  Type: N  Check: 1913  ..

       1  atgggagagc ccactccaac tccagctgcc acctactccg ctgctgaccc
      51  cacttcatca cccaagctgg ccgacctcac cgccatcaag tactcaccgg
     101  tcacctcatc aatcgccaca cccgaagaga tcaaggctat aacccagctg
     151  tgggttaaca cccttggcct ccccgccgac actgtaggca ccgcagccat
     201  tgatttggct cgtgcctacg ctgacgtcgg ggcttccaag tctgctaccc
     251  tgcttggtgt ctgtcccacg aagccagatg tccgccgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa tgtcactccc cgccagtttt gcgcttatta
     351  cgcaaaagtg gtgtggaatc tgatgctggc cactaatgat ccgcccgcca
     401  attgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgtcgattc cactgccgct ttggaacccg ctgaatggca
     501  acgtcgccct accgaccgtg agcgtgccgc ccactcaatc gggaagtacg
     551  gtgctcttgc ccgccaacgc atccagaacg gcaacctcat caccaacatt
     601  gccgaggtta ccaagggcca tcttggatcc actaacaccc tctatgctct
     651  gcctgcacct cctactgaat aa