Sequence of DPV African cassava mosaic virus

African cassava mosaic virus isolate ACMV-[Nam] coat protein (AV1) gene, complete cds.

ACC No: AF423177

Dated: 2002-11-30 | Length: 777 | CRC: -1858754985

                !!NA_SEQUENCE 1.0
ID   AF423177   standard; DNA; VRL; 777 BP.
XX
AC   AF423177;
XX
SV   AF423177.1
XX
DT   26-OCT-2001 (Rel. 69, Created)
DT   30-NOV-2002 (Rel. 73, Last updated, Version 2)
XX
DE   African cassava mosaic virus isolate ACMV-[Nam] coat protein (AV1) gene,
DE   complete cds.
XX
KW   .
XX
OS   African cassava mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-777
RX   MEDLINE; 22072934.
RX   PUBMED; 12076831.
RA   Maruthi M.N., Colvin J., Seal S., Gibson G., Cooper J.;
RT   "Co-adaptation between cassava mosaic geminiviruses and their local vector
RT   populations";
RL   Virus Res. 86(1-2):71-85(2002).
XX
RN   [2]
RP   1-777
RA   Maruthi M.N., Colvin J., Seal S.E.;
RT   "Vector transmission, symptom assessment and coat protein gene sequences of
RT   cassava mosaic geminivirus isolates";
RL   Unpublished.
XX
RN   [3]
RP   1-777
RA   Maruthi M.N., Colvin J., Seal S.E.;
RT   ;
RL   Submitted (25-SEP-2001) to the EMBL/GenBank/DDBJ databases.
RL   Plant, Animal and Human Health Group, Natural Resources Institute,
RL   University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB, UK
XX
DR   SPTREMBL; Q9JEB2; Q9JEB2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .777
FT                   /country="Uganda: Namulonge"
FT                   /db_xref="taxon:10817"
FT                   /note="collected from the cassava mosaic disease pandemic
FT                   region in 1997"
FT                   /organism="African cassava mosaic virus"
FT                   /isolate="ACMV-[Nam]"
FT   CDS             1. .777
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9JEB2"
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="AAL17831.1"
FT                   /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW
FT                   MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH
FT                   RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN
FT                   EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE
FT                   NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN"
XX
SQ   Sequence 777 BP; 227 A; 151 C; 199 G; 200 T; 0 other;

AF423177  Length: 777  February 13, 2003 15:25  Type: N  Check: 9009  ..

       1  atgtcgaagc gaccaggaga tatcatcatt tccactccag gctccaaggt
      51  tcgtcgaaga ctgaacttcg acagcccata caggaaccgt gctactgccc
     101  ccactgtcca cgtcacaaat cgaaaacggg cctggatgaa caggcccatg
     151  tacagaaagc ccatgatgta caggatgtat agaagcccag acatacctag
     201  gggctgtgaa ggcccatgta aggtccagtc gtttgagcaa agggatgatg
     251  tgaagcacct tggtatctgt aaggtgatta gtgatgtgac gcgtgggcct
     301  gggctgacac acagggtcgg aaagaggttt tgtatcaagt ccatttacat
     351  tcttggtaag atctggatgg atgaaaatat taagaagcag aatcacacta
     401  ataatgtgat tttttacctg cttagggata gaaggcctta tggcaatgcg
     451  ccccaagact ttgggcagat atttaacatg tttgataatg agcccagtac
     501  tgcaacaatt aagaacgatt tgagggatag gtttcaggtg ttgaggaaat
     551  ttcatgccac tgttgttggt ggtccatctg gcatgaagga gcaggcgttg
     601  gtgaaaaggt tttataggtt gaatcatcac gtgacatata atcatcagga
     651  ggcagggaag tatgagaatc acacagagaa tgctttgctt ctgtacatgg
     701  catgtactca tgcctccaat cctgtatatg cgacgttgaa aatacgtata
     751  tacttctatg acagtattgg caattaa