Sequence of DPV Arabis mosaic virus

Arabis mosaic virus isolate T71 putative movement protein mRNA, partial cds.

ACC No: AF438345

Dated: 2002-05-03 | Length: 1038 | CRC: 165515971

                !!NA_SEQUENCE 1.0
ID   AF438345   standard; RNA; VRL; 1038 BP.
XX
AC   AF438345;
XX
SV   AF438345.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Arabis mosaic virus isolate T71 putative movement protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Arabis mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
XX
RN   [1]
RP   1-1038
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1038
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1038
FT                   /db_xref="taxon:12271"
FT                   /organism="Arabis mosaic virus"
FT                   /isolate="T71"
FT   CDS             <1. .>1038
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21946.1"
FT                   /translation="ADGRTTGGQTIAQEADPINRRVASNTAPGRAQWISERRSALRRRE
FT                   QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRNAYTPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGQNTLEILYNPVADEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERNMERTFIGSTSTFLGNGLARAIFFPGLQYSQEEPTRESLIRLYVASTN
FT                   ATVDADSILAAISVGTLRQHIGSLHNRTVANSIHAAQVQGTTLRATMMGNAIVVSPEGS
FT                   LVTGTPEANVQIGGGSSMRMVGPLAWENVEEPGQTFTIRNRSRSVRVDRNADVGIAFPR
FT                   MSTTTR"
XX
SQ   Sequence 1038 BP; 252 A; 231 C; 278 G; 277 T; 0 other;

  AF438345  Length: 1038  May 8, 2002 15:56  Type: N  Check: 9333  ..

       1  gcggatggca ggactactgg tgggcaaaca attgcccagg aagctgatcc
      51  tattaatcgt agggtggctt ccaatacagc ccccggtagg gcacaatgga
     101  tctcggagcg ccgcagcgct ctgagacgga gagagcaggc taatagtctg
     151  cagggtcttg ctgctcagac tgatatgaca tttgagcagg ctaggaacgc
     201  ttatcttggt gctgctgaca tgatagagca aggccttccg ctactacctc
     251  cactgaggaa tgcttacaca cctcgtggtt tgtggagagg accttccact
     301  agagccaatt acacgttgga ttttaggctt aatggaattc ccacggggca
     351  aaatacctta gaaatattgt ataatcccgt ggcggacgag gagatggatg
     401  actaccgtga caggggtatg tcagcagtcg tgattgatgc gttggaaatt
     451  gctatcaatc cttttgggat gccaggcaat ccgactgatc ttactgtcgt
     501  tgcaacatat gggcacgagc gtaatatgga acgtaccttt atcggttcca
     551  cctcaacctt tttgggaaat gggttggcga gggccatttt ctttcctggt
     601  ttgcaatata gccaggagga acctacgcgc gaatctttaa ttcgcctata
     651  tgttgcttct actaatgcca ctgttgatgc tgactctata ttggcagcca
     701  ttagtgttgg cactttacgc caacacattg gttcgcttca taatagaaca
     751  gtggcgaatt ctatccatgc tgctcaagtg caaggcacca ctttgagggc
     801  tactatgatg ggtaatgcca tcgtagtttc tcccgaagga agtcttgtaa
     851  ctggaactcc tgaggctaat gtccaaatag gaggtggttc cagtatgcgc
     901  atggttggcc ctctggcgtg ggaaaatgtt gaagaaccag gccagacttt
     951  taccataaga aaccgttctc gatctgtgcg agtggatcgg aatgctgatg
    1001  ttggaattgc ttttcctcgg atgagtacta caacgcgg