Sequence of DPV Arabis mosaic virus

Arabis mosaic virus isolate W17 putative movement protein mRNA, partial cds.

ACC No: AF438346

Dated: 2002-05-03 | Length: 1038 | CRC: -998211784

                !!NA_SEQUENCE 1.0
ID   AF438346   standard; RNA; VRL; 1038 BP.
XX
AC   AF438346;
XX
SV   AF438346.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Arabis mosaic virus isolate W17 putative movement protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Arabis mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
XX
RN   [1]
RP   1-1038
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1038
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1038
FT                   /country="Germany: Eibelstadt/Franken"
FT                   /db_xref="taxon:12271"
FT                   /organism="Arabis mosaic virus"
FT                   /isolate="W17"
FT                   /specific_host="grapevine 'Blaue Sylvaner'"
FT   CDS             <1. .>1038
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21947.1"
FT                   /translation="ADGRTTGGQTIAQEADPINHRVASNTAPGRAAWISERRSALRRRE
FT                   QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRNAYAPRGLWRGPSTRANF
FT                   TLDFRLNGIPTGQNTLEILYNPVADEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLYVASTN
FT                   ATVDADSILAAISVGTLRQHIGSLHNRTVASSVHAAQVQGTTLRATMMGNAVVVSPEGS
FT                   LVTGTPEANVQMGGGSSMRMVGPLAWENVEEPGQTFTIRNRSRSMRVDRNADVGIALPR
FT                   MSTTTR"
XX
SQ   Sequence 1038 BP; 251 A; 231 C; 277 G; 279 T; 0 other;

  AF438346  Length: 1038  May 8, 2002 15:56  Type: N  Check: 7703  ..

       1  gctgatggca ggactactgg tgggcaaaca attgctcagg aagctgatcc
      51  tattaaccat agggtcgctt ccaatacagc tcccggtagg gctgcatgga
     101  tttcagagcg tcgtagtgct ctgagaagga gagagcaggc taacagcctg
     151  caaggccttg ctgctcaaac agacatgaca tttgagcagg ccagaaacgc
     201  atatcttggt gctgctgata tgatcgagca aggcttgcca ctactacctc
     251  cactgagaaa tgcttatgca cctcgtggtc tatggagggg accctctacc
     301  agagccaact tcactttgga ttttaggctc aatggcatcc ctactgggca
     351  aaatactctc gaaattttgt ataacccagt agcggacgag gaaatggatg
     401  actaccgtga caggggtatg tcagcggtcg tgattgatgc acttgaaatt
     451  gctatcaatc cttttggaat gccaggcaat ccgaccgatc ttactgtcgt
     501  ggctacatat gggcatgagc gtaatatgga acgtgccttt attggttcct
     551  cctcgacttt tctcgggaat gggttagcga gggccatttt ctttcctggt
     601  ttgcaatata gtcaggaaga acctaggcgt gaatctctta ttcgcctgta
     651  tgtagcttcc actaatgcca ctgttgatgc tgattccatt ttggcggcta
     701  ttagtgttgg tactttacgc cagcacattg gttcgttgca taataggacg
     751  gtggccagtt ctgtgcatgc tgcacaagtg caaggcacta ccttgagggc
     801  tactatgatg ggtaacgctg tcgtggtatc tcccgaggga agtcttgtta
     851  ctggaacccc tgaagctaat gtccaaatgg gaggtggttc aagcatgcga
     901  atggtgggtc ccttggcttg ggaaaatgtt gaagaacctg gtcaaacttt
     951  taccataaga aaccgctcta ggtccatgcg tgtggatcga aatgctgatg
    1001  ttggaattgc tcttcctaga atgagcacga caacgagg