Sequence of DPV Arabis mosaic virus

Arabis mosaic virus isolate Weyhen putative movement protein mRNA, partial cds.

ACC No: AF438347

Dated: 2002-05-03 | Length: 1038 | CRC: -1356811794

                !!NA_SEQUENCE 1.0
ID   AF438347   standard; RNA; VRL; 1038 BP.
XX
AC   AF438347;
XX
SV   AF438347.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Arabis mosaic virus isolate Weyhen putative movement protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Arabis mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
XX
RN   [1]
RP   1-1038
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1038
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1038
FT                   /country="Germany"
FT                   /db_xref="taxon:12271"
FT                   /organism="Arabis mosaic virus"
FT                   /isolate="Weyhen"
FT                   /specific_host="grapevine 'Chardonnay'"
FT   CDS             <1. .>1038
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21948.1"
FT                   /translation="ADGRTTGGQTIAQEADPINHRVASNTAPGRAEWISERRNALRRRE
FT                   QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRNAYAPRGLWRGPSTRANF
FT                   TLDFRLNGIPTGQNTLEILYNPVADEEMDDYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLYVASTN
FT                   ATVDADSILAAISVGTLRQHIGSLHNRTVASTVHAAQVQGTTLRATMMGNAVVVSPEGS
FT                   LVTGTPEANVQIGGGSSMRMVGPLAWENVDEPGQTFTIRNRSRSMRVDRNADVGIALPR
FT                   MSTTTR"
XX
SQ   Sequence 1038 BP; 261 A; 237 C; 265 G; 275 T; 0 other;

   AF438347  Length: 1038  May 8, 2002 15:56  Type: N  Check: 966  ..

       1  gctgatggta ggactaccgg tgggcaaaca atagcccaag aagctgatcc
      51  tattaaccat agggtcgctt ccaacacagc ccccggtagg gctgaatgga
     101  tttcagagcg ccgcaatgct ctgaggagga gagagcaggc taacagcctg
     151  cagggccttg ctgctcagac tgatatgacg tttgagcaag ctagaaatgc
     201  ttatctcggt gctgctgata tgattgagca aggtctgcct ctattgcctc
     251  ctctgagaaa tgcttatgcg cctcgtggtt tatggcgggg accctctacc
     301  agagccaact ttactttgga tttcaggctc aatggtatcc ctactgggca
     351  aaatacttta gaaatattgt ataacccagt ggcggacgag gaaatggatg
     401  actaccgtga caggggtatg tcagcagtcg tgattgatgc actggaaatt
     451  gccataaatc cttttggaat gccaggcaat ccgactgatc tcactgttgt
     501  agcaacatat gggcatgaac gtaatatgga acgtgccttt attggctctt
     551  catcaacctt ccttggaaat ggtttggcga gagctatttt cttccctggc
     601  ttacaatata gtcaggaaga acccaggcgc gaatctctta ttcgcctata
     651  tgttgcttct accaacgcca ctgttgatgc tgattctatc ttagcagcca
     701  ttagtgtggg cactctacgc caacacatcg gttcactaca caatagaaca
     751  gtggcgagta ctgtacacgc tgctcaagta cagggcacta ctttaagagc
     801  tactatgatg ggtaatgctg ttgtagtttc tcctgaaggg agtcttgtaa
     851  ctggaacccc tgaagctaat gttcaaattg gaggtggttc tagcatgcgg
     901  atggttggtc ccctggcatg ggaaaatgtt gatgaaccag gtcagacttt
     951  tactataaga aaccgctccc ggtctatgcg agtagatcgg aatgctgacg
    1001  ttggaattgc tcttcctcgg atgagcacca caacgcgg