Sequence of DPV Grapevine fanleaf virus

Grapevine fanleaf virus isolate NP1 putative movement protein mRNA, partial cds.

ACC No: AF438349

Dated: 2002-05-03 | Length: 1044 | CRC: 634555167

                !!NA_SEQUENCE 1.0
ID   AF438349   standard; RNA; VRL; 1044 BP.
XX
AC   AF438349;
XX
SV   AF438349.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate NP1 putative movement protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   grapevine fanleaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus.
XX
RN   [1]
RP   1-1044
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1044
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1044
FT                   /country="Germany: North Pfalz"
FT                   /db_xref="taxon:12274"
FT                   /organism="grapevine fanleaf virus"
FT                   /isolate="NP1"
FT                   /specific_host="grapevine 'Riesling'"
FT   CDS             <1. .>1044
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21950.1"
FT                   /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAQWISERRQALRRRE
FT                   QANSLQGLTAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT                   ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTTLRATMMGNTAVVSPEGS
FT                   LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT                   PRLSSTVR"
XX
SQ   Sequence 1044 BP; 256 A; 241 C; 294 G; 253 T; 0 other;

   AF438349  Length: 1044  May 8, 2002 15:56  Type: N  Check: 571  ..

       1  gcggatgggc gcactaccgg tgggcaaaca attgctcaag aggctgatcc
      51  tttgcagcat agggtcagca catctgtggc ccccggtagg gcacaatgga
     101  tttccgagcg cagacaagct ctgcggagga gagagcaggc aaacagcctg
     151  cagggtctta ctgctcaaac tgacatgact tttgagcagg ccaggaatgc
     201  ttatcttggt gctgccgata tgatcgagca aggcctaccg ctgcttcccc
     251  ctctgcgcag cgcttatgcc cccaggggtt tgtggagggg accctcgacc
     301  agagccaact atacgctaga ttttaggctc aatggtatac cgactgggac
     351  gaacacattg gaaattttgt ataatcctgt gtcggaagag gagatggaag
     401  agtaccgtga taggggtatg tcggctgtgg tgattgatgc gctagaaata
     451  gccataaacc cctttggcat gcccggtaat ccaacggact tgactgtcgt
     501  agcaacatat gggcatgagc gtgatatgac gcgcgccttc attggatctg
     551  cttccacatt cttggggaat gggttagcta gagccatttt cttccctggt
     601  ttgcaatata gccaagaaga accaaggcgt gaatctataa ttcgcctata
     651  tgttgcctct actaacgcca ctgtagacac tgattcagtt ttggcagcca
     701  ttagtgttgg tactttgcgt caacatgttg gctccatgca ttatcgaaca
     751  gtggctagta ccgttcatca agcccaggtg cagggaacga cactcagggc
     801  aaccatgatg ggtaacaccg ctgtggtttc acctgaggga agtttagtta
     851  ctgggacccc agaagcaaga gttgaaattg ggggtggttc cagtattagg
     901  atggtgggac ctctacaatg ggaaagtgtg gaggaaccgg gtcaaacctt
     951  ctctatcaga agtcgctcac gatctgtgag gattgataga aatgttgatc
    1001  ttcctcaact tgaggctgag cccagactga gctcaaccgt gagg