Sequence of DPV Grapevine fanleaf virus

Grapevine fanleaf virus isolate Sl1A putative movement protein mRNA, partial cds.

ACC No: AF438351

Dated: 2002-05-03 | Length: 1044 | CRC: -1643591579

                !!NA_SEQUENCE 1.0
ID   AF438351   standard; RNA; VRL; 1044 BP.
XX
AC   AF438351;
XX
SV   AF438351.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate Sl1A putative movement protein mRNA,
DE   partial cds.
XX
KW   .
XX
OS   grapevine fanleaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus.
XX
RN   [1]
RP   1-1044
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1044
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1044
FT                   /country="Slovenia: Sl1A from Vivapa"
FT                   /db_xref="taxon:12274"
FT                   /organism="grapevine fanleaf virus"
FT                   /isolate="Sl1A"
FT                   /specific_host="grapevine 'Volovnic'"
FT   CDS             <1. .>1044
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21952.1"
FT                   /translation="ADGRTTGGQTIAQEADPLQHRVSISVAPGRAQWISERRQALRRRE
FT                   QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVVDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERDMARAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT                   ATVDTDSILAAISVGTLRQHVGSMHYRTVANTVHQAQVQGTTLRATMMGNTVVVSPEGS
FT                   LVTGTPEAKVEIGGGSSIRMVGPLQWESVEEPGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT                   PRLSSTVR"
XX
SQ   Sequence 1044 BP; 261 A; 246 C; 293 G; 244 T; 0 other;

  AF438351  Length: 1044  May 8, 2002 15:56  Type: N  Check: 4981  ..

       1  gcggatggta gaactaccgg tgggcaaacg attgctcaag aagctgaccc
      51  tttgcaacat agggtcagca tatcagtagc ccccggtagg gcacaatgga
     101  tctccgagcg cagacaggct ctgcgaagga gagagcaagc aaatagcttg
     151  cagggtcttg ctgctcagac tgatatgact tttgagcagg ccaggaacgc
     201  ctatcttggc gctgctgaca tgattgagca aggcctaccg ctacttcccc
     251  ctctgcgcag cgcttatgcc cctaggggct tgtggagggg accctcaacc
     301  agagccaatt acacgcttga tttcaggctc aatggtattc cgactgggac
     351  aaacacattg gaaatattgt acaatcccgt gtcggaagaa gagatggaag
     401  agtaccggga cagaggcatg tcggctgtgg tggttgatgc gctagaaata
     451  gctataaacc cgttcggcat gcctggaaat ccaacggact tgactgtcgt
     501  ggcaacttat gggcatgaac gtgatatggc gcgtgccttt attggatctg
     551  cttccacatt cttagggaat gggttagcta gagccatttt ctttcctggc
     601  ttgcaatata gtcaggagga accaaggcgc gaatctataa ttcgcctgta
     651  tgttgcctct actaacgcca ctgtggatac tgattcaatc ttggcggcca
     701  ttagtgttgg caccttgcgt caacacgttg gctccatgca ctatcgtact
     751  gtggcaaata ccgtgcacca ggcccaggtg caaggaacga cactcagggc
     801  cactatgatg ggtaatactg ttgtagtgtc acctgaagga agcctagtca
     851  ctggaacccc cgaagcgaaa gtcgaaatag ggggcggttc aagtattagg
     901  atggtgggac ctctgcaatg ggagagtgta gaggaaccag ggcaaacttt
     951  ctctatcaga agtcgctcac gttccgtgag gattgataga aatgttgatc
    1001  ttcctcaact tgaggctgag cccagattga gctcaaccgt gagg