Sequence of DPV Grapevine fanleaf virus

Grapevine fanleaf virus isolate Sl1C putative movement protein mRNA, partial cds.

ACC No: AF438353

Dated: 2002-05-03 | Length: 1044 | CRC: 946729279

                !!NA_SEQUENCE 1.0
ID   AF438353   standard; RNA; VRL; 1044 BP.
XX
AC   AF438353;
XX
SV   AF438353.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate Sl1C putative movement protein mRNA,
DE   partial cds.
XX
KW   .
XX
OS   grapevine fanleaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus.
XX
RN   [1]
RP   1-1044
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1044
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1044
FT                   /country="Slovenia: Sl1C from Vivapa"
FT                   /db_xref="taxon:12274"
FT                   /organism="grapevine fanleaf virus"
FT                   /isolate="Sl1C"
FT                   /specific_host="grapevine 'Volovnic'"
FT   CDS             <1. .>1044
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21954.1"
FT                   /translation="ADGRTTGGQTIAQEADPLQHRVSISVAPGRAQWISERRQALRRRE
FT                   QANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT                   ATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQVQGTALRATMMGNTVVVSPEGS
FT                   LVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQIFSIKSRSRSVRVDRNVDLPQLEAE
FT                   PRLSSTVR"
XX
SQ   Sequence 1044 BP; 265 A; 238 C; 287 G; 254 T; 0 other;

  AF438353  Length: 1044  May 8, 2002 15:56  Type: N  Check: 7427  ..

       1  gcggatggta gaactaccgg tgggcaaacg attgctcaag aagctgaccc
      51  tttgcaacat agggtcagca tatcagtagc ccccggtagg gcacaatgga
     101  tctccgagcg cagacaggct ctgcgaagga gagagcaagc aaatagcttg
     151  cagggtcttg ctgctcagac tgatatgact tttgagcagg ccaggaacgc
     201  ctatcttggc gctgctgaca tgattgagca aggcctaccg ctacttcccc
     251  ctctgcgcag cgcttatgcc cctaggggct tgtggagggg accctcaacc
     301  agagccaatt acacgcttga tttcaggctc aatggtatcc cgactgggac
     351  aaatacatta gaaattttgt ataatcccgt gtcggaagag gaaatggaag
     401  agtaccggga taggggtatg tcagccgtgg taattgatgc gctagaaata
     451  gcgataaatc catttggcat gcctggtaat ccgacggact taactgttgt
     501  ggcaacgtac ggacatgagc gtgacatgac acgtgccttt attggttctg
     551  cctccacttt cttgggaaat gggctggcac gagctatttt ctttcctggc
     601  ttacaatata gtcaggagga accaaggcgc gaatctataa ttcgcctata
     651  cgttgcttct actaatgcta ctgtagacac tgattcagtc ttggcagcca
     701  ttagcgttgg cactttgcgt caacacgttg gttccatgca ctatcgaacg
     751  gtagctagta ctgtgcatca agcccaggtg caaggtacgg cactcagggc
     801  cactatgatg ggtaatactg ttgtagtgtc gcctgaagga agcctagtta
     851  ctgggacccc tgaagcgaga gttgaaatag ggggtggttc tagtatcagg
     901  atggtaggac ctctacaatg ggagagtgta gaggaaccag ggcaaatctt
     951  ctctatcaaa agccgctcac gatctgtgag agttgataga aatgttgatc
    1001  ttcctcaact tgaggctgag cccagattga gctcaaccgt gaga