Sequence of DPV Grapevine fanleaf virus

Grapevine fanleaf virus isolate Tun1 putative movement protein mRNA, partial cds.

ACC No: AF438356

Dated: 2002-05-03 | Length: 1044 | CRC: -654750344

                !!NA_SEQUENCE 1.0
ID   AF438356   standard; RNA; VRL; 1044 BP.
XX
AC   AF438356;
XX
SV   AF438356.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Grapevine fanleaf virus isolate Tun1 putative movement protein mRNA,
DE   partial cds.
XX
KW   .
XX
OS   grapevine fanleaf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus.
XX
RN   [1]
RP   1-1044
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1044
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1044
FT                   /country="Tunisia: Raf Raf"
FT                   /db_xref="taxon:12274"
FT                   /organism="grapevine fanleaf virus"
FT                   /isolate="Tun1"
FT                   /specific_host="grapevine 'Farrani'"
FT   CDS             <1. .>1044
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21957.1"
FT                   /translation="ADGRTTGGQTIAQEADPLQHRVSTSVAPGRAEWISERRQALRRRE
FT                   QANSLQGLAVQTDMTFEQARNAYLGAADMIEQGLPLLPPLRSAYAPRGLWRGPSTRANY
FT                   TLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMSAVVIDALEIAINPFGMPGNPTD
FT                   LTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPGLQYSQEEPRRESIIRLYVASTN
FT                   ATVDADSVLAAISIGTLRQHVGSLHYRTVASAVHQAQVQGTTLRATMMGNAVVVSPEGS
FT                   LVTGTPEARVEIGGGSSIRMVGPLQWESVEEQGQTFSIRSRSRSVRIDRNVDLPQLEAE
FT                   PRLSSTVR"
XX
SQ   Sequence 1044 BP; 255 A; 236 C; 296 G; 257 T; 0 other;

  AF438356  Length: 1044  May 8, 2002 15:56  Type: N  Check: 2021  ..

       1  gcggatggaa gaactactgg tgggcagacg attgctcaag aagctgatcc
      51  cttgcaacat agggtcagca cttctgtggc ccccggtagg gctgaatgga
     101  tctctgagcg cagacaagct ctgcggagga gagagcaggc taatagcttg
     151  cagggtcttg ctgttcaaac agacatgaca tttgagcagg ccaggaacgc
     201  ctatcttggt gctgctgata tgattgagca aggcctaccg ctgcttcccc
     251  ctctgcgcag cgcatacgct cctaggggct tgtggagagg accttctacc
     301  agagccaatt acacgctaga ctttaggctc aatggtatac cgactgggac
     351  aaatacacta gaaattttat ataatcccgt gtcggaagaa gagatggagg
     401  agtaccggga caggggcatg tctgccgtgg tgattgatgc gctagaaata
     451  gccataaatc cttttggcat gcctgggaat ccaacggact tgaccgtcgt
     501  tgcgacatat ggtcatgagc gtgatatgac acgcgccttt attggttctg
     551  cttccacatt cttggggaat gggctagcta gagctatttt cttccctggt
     601  ttacagtata gccaggagga accaaggcgt gaatctataa ttcgcctata
     651  tgtcgcttct accaatgcca ctgtggacgc tgattcagtt ttggcggcca
     701  ttagtattgg cactttgcgt caacacgttg gctccctgca ttataggaca
     751  gtggctagtg ccgtgcacca ggcccaggtg caaggaacga cacttagggc
     801  tacgatgatg ggtaatgccg tcgttgtatc acctgaagga agccttgtta
     851  ctgggacccc tgaagcaaga gttgaaattg ggggtggttc cagtatcagg
     901  atggtggggc ctctacaatg ggaaagtgta gaggaacaag ggcaaacctt
     951  ttctatcaga agccgttcac gatctgtgag gattgacaga aatgttgatc
    1001  ttcctcaact tgaagctgag cccaggttga gttcaaccgt gaga