Sequence of DPV Arabis mosaic virus

Arabis mosaic virus isolate Muscadelle putative movement protein mRNA, partial cds.

ACC No: AF438358

Dated: 2002-05-03 | Length: 1038 | CRC: 450141014

                !!NA_SEQUENCE 1.0
ID   AF438358   standard; RNA; VRL; 1038 BP.
XX
AC   AF438358;
XX
SV   AF438358.1
XX
DT   03-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2002 (Rel. 71, Last updated, Version 1)
XX
DE   Arabis mosaic virus isolate Muscadelle putative movement protein mRNA,
DE   partial cds.
XX
KW   .
XX
OS   Arabis mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
XX
RN   [1]
RP   1-1038
RX   MEDLINE; 21839360.
RX   PUBMED; 11849684.
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   "Simultaneous RT/PCR detection and differentiation of arabis mosaic and
RT   grapevine fanleaf nepoviruses in grapevines with a single pair of primers";
RL   J. Virol. Methods 101(1-2):63-69(2002).
XX
RN   [2]
RP   1-1038
RA   Wetzel T., Jardak R., Meunier L., Ghorbel A., Reustle G.M., Krczal G.;
RT   ;
RL   Submitted (22-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Staatliche Lehr- und Forschungsanstalt, Centrum Gruene Gentechnik,
RL   Breitenweg 71, Neustadt an der Weinstrasse, rlp 67435, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1038
FT                   /country="France: Le Grau du Roy"
FT                   /db_xref="taxon:12271"
FT                   /organism="Arabis mosaic virus"
FT                   /isolate="Muscadelle"
FT                   /specific_host="grapevine 'Muscadelle'"
FT   CDS             <1. .>1038
FT                   /codon_start=1
FT                   /product="putative movement protein"
FT                   /protein_id="AAM21959.1"
FT                   /translation="ADGRTTGGQTIAQEADPINHRVASNTAPGRAEWISERRSALRRRE
FT                   QANSLQGLATQTDMTFEQARNAYLGAADMVEQGLSLLPPLRNAYAPRGLWRGPSTRANF
FT                   TLDFRLNGIPTGQNTLEITYNPVADEEMDDYRDRGMSAVVIDALEIAINPFGLPGNPTD
FT                   LTVVATYGHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLYVASTN
FT                   ATVDADSILAAISVGTLRQHIGSLHNRTVARSVHAAQVQGTTLRATMMGNTVVVSPEGN
FT                   LVAGTPAASVQIGGGSSMRMVGPLTWENVEEPGQTFTIRNRSRSVRVDRNADVGIALPR
FT                   MSTTTR"
XX
SQ   Sequence 1038 BP; 255 A; 234 C; 267 G; 282 T; 0 other;

  AF438358  Length: 1038  May 8, 2002 15:56  Type: N  Check: 8215  ..

       1  gctgatggta gaactactgg tgggcaaaca attgctcagg aggctgaccc
      51  tattaatcat agagtcgcct ctaatacagc tcccggtaga gctgaatgga
     101  tctcagagcg tcgcagcgct ctcagaagaa gagagcaagc taatagcttg
     151  caaggccttg ctactcaaac tgacatgacg tttgagcaag ccagaaatgc
     201  ttatcttgga gcagctgaca tggttgagca aggcctgtct ctactacctc
     251  ccttgagaaa tgcctatgca cctcgtggtc tatggagggg accctctacc
     301  agagccaatt ttactttaga tttcaggctc aatggtatcc ctactggaca
     351  aaatacattg gaaattacgt ataatcctgt agcggacgag gaaatggatg
     401  actaccgtga caggggtatg tcagcggttg tgattgatgc acttgaaatt
     451  gccattaatc cttttgggct gccaggcaat ccaaccgatc ttactgtcgt
     501  tgcaacatac gggcatgaac gcaatatgga acgtgccttt attggttctt
     551  cgtcaacctt tcttgggaat ggtttggcga gagctatttt ctttcctggt
     601  ttgcaatata gccaagaaga acctaggcgt gaatccctta ttcgcctgta
     651  tgttgcctcc accaacgcca ctgttgatgc tgattctata ttagcggcta
     701  ttagtgttgg cactttgcgc cagcacattg gttcgcttca caataggaca
     751  gtggctcgtt ctgtgcatgc tgcacaagta cagggtacta ctttgagggc
     801  tactatgatg ggtaataccg ttgtagtttc ccctgaagga aatcttgtgg
     851  ctggaacccc tgcagccagc gtccagattg gaggtggttc tagcatgagg
     901  atggttgggc ctttaacttg ggaaaatgtt gaagaaccag gacagacttt
     951  taccattaga aaccgttccc ggtctgtgag agtggaccgg aatgccgatg
    1001  ttggaattgc tcttcctcgg atgagcacta cgacgcgg