Sequence of DPV Potato leafroll virus

Potato leaf roll virus isolate Au16 P0 gene, complete cds; and P1 gene, partial cds.

ACC No: AF453395

Dated: 2002-06-19 | Length: 933 | CRC: -796855905

                !!NA_SEQUENCE 1.0
ID   AF453395   standard; RNA; VRL; 933 BP.
XX
AC   AF453395;
XX
SV   AF453395.1
XX
DT   05-FEB-2002 (Rel. 70, Created)
DT   19-JUN-2002 (Rel. 72, Last updated, Version 3)
XX
DE   Potato leaf roll virus isolate Au16 P0 gene, complete cds; and P1 gene,
DE   partial cds.
XX
KW   .
XX
OS   Potato leafroll virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
XX
RN   [1]
RP   1-933
RA   Guyader S., Giblot Ducray D.;
RT   "Sequence analysis of Potato leafroll virus isolates reveals genetic
RT   stability, major evolutionary events and differential selection pressure
RT   between overlapping reading frame products";
RL   J. Gen. Virol. 83(7):1799-1807(2002).
XX
RN   [2]
RP   1-933
RA   Guyader S., Giblot Ducray D.;
RT   ;
RL   Submitted (29-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   UMR BiO3P, Institut National de la Recherche Agronomique, Domaine de la
RL   Motte, BP 35327, Le Rheu 35653, France
XX
DR   SPTREMBL; Q8V243; Q8V243.
DR   SPTREMBL; Q8V244; Q8V244.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .933
FT                   /country="Australia"
FT                   /db_xref="taxon:12045"
FT                   /virion
FT                   /organism="Potato leafroll virus"
FT                   /isolate="Au16"
FT   5'UTR           <1. .53
FT   CDS             54. .797
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q8V244"
FT                   /note="ORF0"
FT                   /product="P0"
FT                   /protein_id="AAL73409.1"
FT                   /translation="MIVLTQSGTLLFDQRFKLSKFLFVVIATGFPLLLQQASLIYGYSH
FT                   EQIYRICRSFLYVLPLLNCKRGRISTSGLQLPRHLHYECLEWGLLCGTHPAIQIVGPTI
FT                   VIKLDDPTTAAAYRSELLRVSSSSYIQNAAGLSNGWGHDMEAFVRNAICLLELRERSIP
FT                   QSGLRNLMGNYQHLVRSLLDACQVDHFVPLDFQHRSLLLNFARLYNQLDLQGRAKSFRA
FT                   LTGFPVYVPSEDYLEGSFLQKELQE"
FT   CDS             187. .>933
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q8V243"
FT                   /note="polyprotein; contains proteinase and VPg; ORF1"
FT                   /product="P1"
FT                   /protein_id="AAL73410.1"
FT                   /translation="MNRFTVYAALFFMFSLCSTAKEAGFLHPAFNFRGTSTMSASSGDY
FT                   SAAPTPLYKSWALPSSLNLTTQPPPLLTDRSYYELVQALISKMRLDCQMVGDMTWRHLS
FT                   EMLFASWNSVKEVSLKAASVTLWAIISIWFGLYWTLARLITLFLWTFSIEAFCLILLGC
FT                   ITSLIYKGALSLSEHLPVFLFMFPLKTIWRAAFSKRNYKNEKAVEGYKGFSVPQKPPKS
FT                   AVIELQHENGSHLGYANCIRLYSGENA"
XX
SQ   Sequence 933 BP; 236 A; 232 C; 199 G; 266 T; 0 other;

  AF453395  Length: 933  June 25, 2002 09:08  Type: N  Check: 2803  ..

       1  gaaattgcag ctttagcgca taaactctac actcattgca aacgttatag
      51  catatgattg tattgaccca gtctggaacc ttgctttttg accaaagatt
     101  taaactttca aagtttctct tcgttgtcat tgcaacaggc tttcctcttc
     151  tcctacagca agcgagctta atttacggat acagtcatga acagatttac
     201  cgtatatgcc gctcttttct ttatgttctc cctttgctca actgcaaaag
     251  aggcaggatt tctacatccg gccttcaact tccgaggcac ctccactatg
     301  agtgcctcga gtggggatta ctctgcggca cccaccccgc tatacaaatc
     351  gtgggcccta ccatcgtcat taaacttgac gacccaacca ccgccgctgc
     401  ttacagatcg gagctactac gagttagttc aagctcttat atccaaaatg
     451  cggctggatt gtcaaatggt tggggacatg acatggaggc atttgtcaga
     501  aatgctattt gcctcttgga actccgtgaa agaagtatcc ctcaaagcgg
     551  cctccgtaac cttatgggca attatcagca tttggttcgg tctctattgg
     601  acgcttgcca ggttgatcac tttgttcctc tggactttca gcatagaagc
     651  cttttgctta attttgctcg gttgtataac cagcttgatc tacaagggcg
     701  cgctaagtct ttcagagcac ttaccggttt tcctgtttat gttccctctg
     751  aagactatct ggagggcagc tttctccaaa aggaattaca agaatgagaa
     801  ggctgtggaa ggatacaaag ggttttcggt cccacagaaa ccgccaaagt
     851  ctgccgtaat tgaactacaa catgaaaacg gcagccatct cgggtacgcg
     901  aactgcattc gcttgtacag tggagagaac gcc