Sequence of DPV Potato leafroll virus
Potato leaf roll virus isolate Au40b P0 gene, complete cds; and P1 gene, partial cds.
ACC No: AF453396
Dated: 2002-06-19 | Length: 933 | CRC: -754803125
!!NA_SEQUENCE 1.0
ID AF453396 standard; RNA; VRL; 933 BP.
XX
AC AF453396;
XX
SV AF453396.1
XX
DT 05-FEB-2002 (Rel. 70, Created)
DT 19-JUN-2002 (Rel. 72, Last updated, Version 3)
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DE Potato leaf roll virus isolate Au40b P0 gene, complete cds; and P1 gene,
DE partial cds.
XX
KW .
XX
OS Potato leafroll virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Polerovirus.
XX
RN [1]
RP 1-933
RA Guyader S., Giblot Ducray D.;
RT "Sequence analysis of Potato leafroll virus isolates reveals genetic
RT stability, major evolutionary events and differential selection pressure
RT between overlapping reading frame products";
RL J. Gen. Virol. 83(7):1799-1807(2002).
XX
RN [2]
RP 1-933
RA Guyader S., Giblot Ducray D.;
RT ;
RL Submitted (29-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL UMR BiO3P, Institut National de la Recherche Agronomique, Domaine de la
RL Motte, BP 35327, Le Rheu 35653, France
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DR SPTREMBL; Q8V241; Q8V241.
DR SPTREMBL; Q8V242; Q8V242.
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FH Key Location/Qualifiers
FH
FT source 1. .933
FT /country="Australia"
FT /db_xref="taxon:12045"
FT /virion
FT /organism="Potato leafroll virus"
FT /isolate="Au40b"
FT 5'UTR <1. .53
FT CDS 54. .797
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8V242"
FT /note="ORF0"
FT /product="P0"
FT /protein_id="AAL73411.1"
FT /translation="MIVLTQSGILLFDQRFKLSKFLFVVIATGFPLLLQQASLIYGYSH
FT EQHHRICRSFLYVLPLLNCKRGRISTSGLQLPRHLHYECLEWGLLCGTHPAIQIVGPTI
FT VIKLDDPTTAAAYRSELLRVSSSSYIQNAAGLSNGWGHDMEALVRNAICLLELRERSIP
FT QSGLRNLMGNYQHLVRSLLDACQVDHFVPLDFQHRSLLLNFARLYNQLDLQGRAKSFRA
FT LTGIPIYVPSEDYLEGSFLQKELQE"
FT CDS 187. .>933
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8V241"
FT /note="polyprotein; contains proteinase and VPg; ORF1"
FT /product="P1"
FT /protein_id="AAL73412.1"
FT /translation="MNSTTVYAALFFTFSLCSTAKEAGFQHPAFNFRGTSIMSALSGDY
FT SAAPTPQYKSWALPSSLNLTTQPPPLLTDRSYYELVQALISKMRLDCQTVGDMTWRHLS
FT EMLFASWNSVKEVSLKAASVTLWAIISIWFGLYWTLARLITLFLWTFSIEAFCLILLGC
FT ITSLIYKGVLNLSEHLPVFLFMSPLKIIWRVAFSKKNYKNEKAVEGYNGFTVPQKPPKS
FT AVIELQHENGSHLGYANCVRLYSGENA"
XX
SQ Sequence 933 BP; 239 A; 235 C; 199 G; 260 T; 0 other;
AF453396 Length: 933 June 25, 2002 09:08 Type: N Check: 9101 ..
1 gaaattgcag ctttagcgca caaactctac actcattgca aacgttatag
51 catatgattg tattgaccca gtctggaatc ttgctttttg accaaagatt
101 taaactttca aagtttctct tcgttgtcat tgcaacaggc tttcctcttc
151 tcctgcagca agcgagctta atttacggat acagtcatga acagcaccac
201 cgtatatgcc gctcttttct ttacgttctc cctttgctca actgcaaaag
251 aggcaggatt tcaacatccg gccttcaact tccgaggcac ctccattatg
301 agtgccttga gtggggatta ctctgcggca cccaccccgc aatacaaatc
351 gtgggcccta ccatcgtcat taaacttgac gacccaacca ccgccgctgc
401 ttacagatcg gagctactac gagttagttc aagctcttat atccaaaatg
451 cggctggatt gtcaaacggt tggggacatg acatggaggc acttgtcaga
501 aatgctattt gcctcctgga actccgtgaa agaagtatcc ctcaaagcgg
551 cctccgtaac cttatgggca attatcagca tttggttcgg tctctattgg
601 acgcttgcca ggttgatcac tttgttcctc tggactttca gcatagaagc
651 cttttgctta attttgctcg gttgtataac cagcttgatc tacaagggcg
701 tgctaaatct ttcagagcac ttaccggtat tcctatttat gtcccctctg
751 aagattatct ggagggtagc tttctccaaa aagaactaca agaatgagaa
801 agctgtggaa gggtacaacg ggtttacggt cccacaaaaa ccgccaaagt
851 ctgccgtgat tgaactacaa catgagaacg gcagccatct cgggtacgcg
901 aactgtgttc gtttgtacag tggagagaac gcc