Sequence of DPV Potato leafroll virus
Potato leaf roll virus isolate K5 P0 gene, complete cds; and P1 gene, partial cds.
ACC No: AF453399
Dated: 2002-06-19 | Length: 933 | CRC: -2099508654
!!NA_SEQUENCE 1.0
ID AF453399 standard; RNA; VRL; 933 BP.
XX
AC AF453399;
XX
SV AF453399.1
XX
DT 05-FEB-2002 (Rel. 70, Created)
DT 19-JUN-2002 (Rel. 72, Last updated, Version 3)
XX
DE Potato leaf roll virus isolate K5 P0 gene, complete cds; and P1 gene,
DE partial cds.
XX
KW .
XX
OS Potato leafroll virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Polerovirus.
XX
RN [1]
RP 1-933
RA Guyader S., Giblot Ducray D.;
RT "Sequence analysis of Potato leafroll virus isolates reveals genetic
RT stability, major evolutionary events and differential selection pressure
RT between overlapping reading frame products";
RL J. Gen. Virol. 83(7):1799-1807(2002).
XX
RN [2]
RP 1-933
RA Guyader S., Giblot Ducray D.;
RT ;
RL Submitted (29-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL UMR BiO3P, Institut National de la Recherche Agronomique, Domaine de la
RL Motte, BP 35327, Le Rheu 35653, France
XX
DR SPTREMBL; Q8V235; Q8V235.
DR SPTREMBL; Q8V236; Q8V236.
XX
FH Key Location/Qualifiers
FH
FT source 1. .933
FT /country="Spain"
FT /db_xref="taxon:12045"
FT /virion
FT /organism="Potato leafroll virus"
FT /isolate="K5"
FT 5'UTR <1. .53
FT CDS 54. .797
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8V236"
FT /note="ORF0"
FT /product="P0"
FT /protein_id="AAL73417.1"
FT /translation="MIVLTQSGTLLFDQRFKLSKFLFVVIATGFPLLLQQASLIYGYNH
FT EQIYRICRSFLYVLPLLNCKRGRISTSGLQLPRHLHYECLEWGLLCGTHPAIQIVGPTI
FT VIKLDDPTTTAAYRSELLRVSSSSYIQNAAGLSNGWGHDMETFVRNAICLLELRERSIP
FT QSSLRDLMGNYQHLVRSLLDACEVDHSVPLDFQHRSLMLNLARLYNQLDLQGRAKSFRA
FT LTGFPVYVPSEDYLEGSFLQKELQE"
FT CDS 187. .>933
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8V235"
FT /note="polyprotein; contains proteinase and VPg; ORF1"
FT /product="P1"
FT /protein_id="AAL73418.1"
FT /translation="MNRFTAYAALFFMFSLCSTAKEAGFQHPAFNFRGTSTMSALSGDY
FT FAAPTPLYKSWALPSSLNLTTQPLPPLTDRSYYELVQALISKMRLDCRTVGDMTWRHLS
FT EMLFASWNSVKEASLKAASVTLWAIISIWFGLYWTLARLITLFLWTFSIEALCLILLGC
FT ITSLIYKGALSLSEHLPVFLFMSPLKIIWRAAFSKRNYKNERAVEGYKGFSVPQKPPKS
FT AVIELQHENGSHLGYANCIRLYSGENA"
XX
SQ Sequence 933 BP; 235 A; 236 C; 201 G; 261 T; 0 other;
AF453399 Length: 933 June 25, 2002 09:08 Type: N Check: 9841 ..
1 gaaattgcag ctttagcgca taaactctac actcattgca aacgttatag
51 catatgattg tattgaccca gtctggaacc ttgctttttg accaaagatt
101 taaactctca aagtttctct tcgttgtcat tgcaacaggc tttcctcttc
151 tcctgcagca agcgagctta atttacggtt acaatcatga acagatttac
201 cgcatatgcc gctcttttct ttatgttctc cctttgctca actgcaaaag
251 aggcaggatt tcaacatccg gccttcaact tccgaggcac ctccactatg
301 agtgccttga gtggggatta ctttgcggca cccaccccgc tatacaaatc
351 gtgggcccta ccatcgtcat taaacttgac gacccaacca ctaccgccgc
401 ttacagatcg gagctactac gagttagttc aagctcttat atccaaaatg
451 cggctggatt gtcgaacggt tggggacatg acatggagac atttgtcaga
501 aatgctattt gcctcctgga actccgtgaa agaagcatcc ctcaaagcag
551 cctccgtgac cttatgggca attatcagca tttggttcgg tctctactgg
601 acgcttgcga ggttgatcac tctgttcctc tggactttca gcatagaagc
651 cttatgctta atcttgctcg gttgtataac cagcttgatc tacaagggcg
701 cgctaagtct ttcagagcac ttaccggttt tcctgtttat gtcccctctg
751 aagattattt ggagggcagc tttctccaaa aggaattaca agaatgagag
801 ggctgtggag ggctacaaag ggttttcggt tccacagaaa ccgccaaagt
851 ctgccgtaat tgaactacaa catgaaaacg gcagccatct cgggtacgcg
901 aactgcattc gcttgtacag tggagagaac gcc