Sequence of DPV Mirabilis mosaic virus
Mirabilis mosaic virus, complete genome.
ACC No: AF454635
Dated: 2002-06-15 | Length: 7857 | CRC: 2044922673
!!NA_SEQUENCE 1.0
ID AF454635 standard; circular DNA; VRL; 7857 BP.
XX
AC AF454635;
XX
SV AF454635.1
XX
DT 15-JUN-2002 (Rel. 72, Created)
DT 15-JUN-2002 (Rel. 72, Last updated, Version 1)
XX
DE Mirabilis mosaic virus, complete genome.
XX
KW .
XX
OS Mirabilis mosaic virus
OC Viruses; Retroid viruses; Caulimoviridae; Caulimovirus.
XX
RN [1]
RP 1-7857
RX MEDLINE; 99415134.
RX PUBMED; 10487212.
RA Dey N., Maiti I.B.;
RT "Structure and promoter/leader deletion analysis of mirabilis mosaic virus
RT (MMV) full-length transcript promoter in transgenic plants";
RL Plant Mol. Biol. 40(5):771-782(1999).
XX
RN [2]
RP 1-7857
RA Dey N., Maiti I.B.;
RT "Promoter deletion and comparative expression analysis of the Mirabilis
RT mosaic caulimovirus (MMV) sub-genomic transcript (Sgt) promoter in
RT transgenic plants";
RL Transgenics 0:0-0(2002).
XX
RN [3]
RP 1-7857
RA Maiti I.B.;
RT "Genomic sequence of mirabilis mosaic caulimovirus (MMV)";
RL Unpublished.
XX
RN [4]
RP 1-7857
RA Maiti I.B.;
RT ;
RL Submitted (03-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL University of Kentucky, THRI-224, Cooper & University Drives, Lexington, KY
RL 40546-0236, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .7857
FT /db_xref="taxon:194445"
FT /organism="Mirabilis mosaic virus"
FT CDS join(7666. .7857,1. .36)
FT /codon_start=1
FT /note="ORFVII"
FT /protein_id="AAM53130.1"
FT /translation="MNLSSTELIAILLAPDKAILLAKNLLENPVKNERRNEPFIYSLPR
FT HAEHPMLPEIPLWQIFCPTWYQSHVLIIFS"
FT CDS 38. .1009
FT /codon_start=1
FT /note="ORFI"
FT /protein_id="AAM53124.1"
FT /translation="MNQEDKNLEDHTSEKDNHIIFKNEDNMGYQVNIMIQQDQLKKINK
FT KKLSLSKEEVFTSSLWNNVKSMLNRKNEIIYCISSQEMSVDISDVSGRVYLPLLPKKEV
FT EQKLSKLKPELRKKISIVHFGAIKILITAQFSHGINSPIKMALIDNRIKDRKDCLLGTA
FT RGNLSHGKFMFTVYPKFGVSLNTQRFDEILSFIHEFERPDLMDKGDKIFSVTYLTAYAL
FT ANSIHSIEYKNNSDIEIDEVFSELGNVQERSFCEIPSYDENWSINIDRNKTRINSKPRE
FT TVRGNTLTFGEGTSQNQNQLLRQMSKNIDCLREKLEQISGNE"
FT CDS 1002. .1499
FT /codon_start=1
FT /note="ORFII"
FT /protein_id="AAM53125.1"
FT /translation="MSNAQANPHIYKKDKYVRLKPLEPTSSKKRRYIFASNDETSSIKT
FT IAAHCNNLNTIVAKNWLKLSKLLSYLGLEKDESEAYSKNKVPFGNFFTKLRASKVGEDK
FT EKTANLLPTLQEMSSRIGKISEETKKLAENDVVTNKQLETIIKDFDRRLSEIQNSVKAI
FT VG"
FT CDS 1500. .1874
FT /codon_start=1
FT /note="ORFIII"
FT /protein_id="AAM53126.1"
FT /translation="MSTISELAVLIEELKKEVADLVTTVKDLAKDKSPETDQNALKSLG
FT AKIIKDISDKIDQCECTDKLFDRLKGKGSVIPTQQETPEVSEGAKYQKYSWPNHNVGNP
FT ELGSSGVKNPVYWPPTSFPS"
FT CDS 1896. .3359
FT /codon_start=1
FT /note="ORFIV"
FT /protein_id="AAM53127.1"
FT /translation="MVNDLEEIFFNKLNLDEEIRDEAHYEEIQELVQILSMEDHEIEEK
FT FINNENLRNRYFSKEESNSLMKIVSNSEDAEISEPETENQETDYSTEESIDFSEEEELL
FT EQLDNLFPVNQETQPNNKRHAEEQPSTSGTGKYYRAPFQKGTPGDRPREIGTINIDCIG
FT DLDLRRKIIDKWINEIDLIVQTSPNDFTTSRSVLVLMEHRSDGMIRNFIKKASWSSQMT
FT GSQTPQDVAAGLYTMFVGVDYATDQANQIRLEKEKAKQTLTNAQLCDICLLDDFTCLFE
FT KNLVHFEMSEMPAWVETYLRKIPIVGEISRMIYNETKSPATTYSLAFATRIVKTEIAKI
FT CEARSKAKQLKRFSQCCKKLSINDSENNQFGCNKPSYSSKRKKYEKSRRKVWKKTKRKF
FT APSKYFKRKSSKKDKNPRKNFCPQGKKKCRCWICSEEGHYANECPNRSKNPERVKILIK
FT GYQQDYEPVEDMYEGTLHVYSYEYDTDSE"
FT CDS 3356. .5380
FT /codon_start=1
FT /note="ORFV"
FT /protein_id="AAM53128.1"
FT /translation="MKRNTLFKWGEFSPNKFCNLANKTNPNSIYIEAKVKFKGYQTLSL
FT HCYVDTGASLCLASKHVIPDDFWENAPRSIPVKIANQSSITLNKVCRGLKINIAGNEFF
FT IPTIYQQETGIDILLGNNFCQTYQPFIQWVDHIAFHIKENNEEKRVLIPKVRIAMRKGH
FT PGFLEAMRKGSGKKPVPGTNITQEVIDDEEKGFIEISKFREIEQLLEKVCSENPIDPEK
FT SKGWMKAEIKLIKPETVVRVKPMVYSPEDRKEFEIQIKELLDLKVIIPSKSQHMSPAFL
FT VEKEAEKRRGKKRMVVNYKKLNEVTIGDSHNLPNMQELITLLRGKNIFSSFDCKSGFWQ
FT VLLDDESQKLTAFTCPQGHYQWRVVPFGLKQAPSIFQRHMQDALRGLEEFSLVYVDDII
FT VFSDNKNDHQDHVMKVLRRIESLGIILSKKKANLFKEKINFLGLEIDRGTHTPQNHILD
FT HIHTFPDRIEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWTQSDTDYV
FT KKIKKGLINFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPA
FT ELNYHSNEKELLAVKQVITKFSIYLTPVCFTVRTDNVNLLKGFMNKKITGDSKQGRLIR
FT WQMWFSHYTFKVDHLKGEQNVLADYLTREFHNGNVIHDD"
FT misc_feature 5381. .5419
FT /note="small intergenic region"
FT CDS 5420. .7030
FT /codon_start=1
FT /note="ORFVI"
FT /protein_id="AAM53129.1"
FT /translation="MKIPHKTHPFFKGGELNQKQEKQKPVMEKELQALRIKEKILLVEL
FT DSIRKQISIYAELTGSLDQEGSASHSKPSPQQTADGKDGSNPLNPDALGKSITENLVPS
FT PEKDESKKVVSLRKTESGLYIPTTSPVANGSGKDTTNPLTADTLLKSDNEDINLRPSYA
FT SMMMKKPLPAEKFYVVYNGDHPGIYTDWAHVLKASSSQKGIIIKKFLSFAEANISASKY
FT SIRHGGIIKYKGPIPILPKKEAAAPRRRLVQKPEEKKEDHFPKVSFEQFISLWRKARDT
FT VPEDYVKEQYWTDDKNSRSLFIFGPNADPVLVFAAFNAGLIKTIYPSGNLQEIKEFPSE
FT FKKAVKTFRSKIAKAKDANIFIRVTSSLPDWEKEEDYQGYHFLEIGLAQEREFRPSERM
FT EDSENLHQQIIQVRINGLINILTAMGKIDEKSKTKINYAHQHVLITSYCGTPISSTDIN
FT ILSSFEDKIIMLKIRVGATTKTLLCQKLKKMMPDSHLCEACEAGPSTKKISEASSSGPS
FT THSSISEQQDEGNDVSHDV"
FT misc_feature 7031. .7665
FT /note="large intergenic region"
XX
SQ Sequence 7857 BP; 2890 A; 1482 C; 1507 G; 1978 T; 0 other;
AF454635 Length: 7857 June 25, 2002 09:06 Type: N Check: 5632 ..
1 tggtatcaga gccatgtgct cataatattt tcttgaaatg aatcaggaag
51 ataagaacct tgaggatcat acctctgaaa aagataatca tattatcttt
101 aaaaacgaag ataacatggg ttatcaagtt aatatcatga tccaacagga
151 tcaattgaaa aagataaaca aaaagaaact tagtttatct aaagaggaag
201 tgtttacttc atctctctgg aataacgtca agagtatgtt aaaccggaaa
251 aatgagataa tatactgtat ttcttcacaa gaaatgtcag ttgacatctc
301 tgacgtctct ggacgtgtat acttaccttt attacccaaa aaggaagtag
351 aacaaaagct ttctaagctt aaacctgagc taaggaaaaa gatttccata
401 gttcactttg gtgcaatcaa aattctcata actgctcaat tcagtcatgg
451 aattaattca ccaatcaaaa tggctttgat cgacaaccga atcaaagacc
501 gaaaagactg tctccttggg acagcaagag gaaacttgag tcacggtaaa
551 tttatgttta ctgtttaccc aaagtttgga gttagtctca acactcaacg
601 ttttgacgaa atactcagct ttatccacga gttcgaaaga ccggacctaa
651 tggacaaagg tgacaagatc ttctctgtaa cttaccttac agcatatgct
701 cttgcaaata gtattcattc catagaatac aaaaataatt ctgatataga
751 gatagacgaa gtcttctcag aacttggcaa tgtccaagag agatcatttt
801 gcgagattcc ctcgtatgat gaaaattggt caatcaacat tgacagaaac
851 aagactagga ttaattctaa acctagagaa actgttaggg gaaacaccct
901 tacctttggt gaaggcacaa gccaaaacca aaatcaatta cttagacaaa
951 tgtctaaaaa tattgactgt ttaagagaaa aacttgaaca gatcagtgga
1001 aatgagtaac gcacaagcga atcctcatat ctacaagaag gacaaatatg
1051 tccgcttaaa acctttggaa cctaccagtt ctaagaaaag gaggtacatc
1101 tttgcgtcaa atgacgaaac cagtagcatt aagactattg ctgctcactg
1151 taacaatctt aataccattg ttgctaaaaa ctggcttaag ctcagtaaac
1201 ttctatccta tttaggatta gagaaggatg aaagtgaagc ttattcaaag
1251 aataaggttc cctttggtaa tttctttact aaactccgtg cttcaaaagt
1301 gggggaggat aaagaaaaaa ccgctaatct gctacctact ttgcaggaaa
1351 tgtctagcag gataggaaaa atttctgagg aaacaaagaa attggcagaa
1401 aatgacgtgg taactaacaa gcagttagaa accataatca aagactttga
1451 tagaagacta tcagaaatcc aaaatagtgt caaggctatt gtaggataaa
1501 tgtcgaccat cagcgaactt gcagttctga tagaagaact caagaaagaa
1551 gtagctgacc tagtcactac agtcaaagat cttgcaaagg acaagagtcc
1601 tgaaacagat caaaatgccc taaaaagcct aggagcaaaa atcatcaaag
1651 atatatctga caagatagat caatgcgaat gcactgataa actctttgat
1701 agactcaagg gtaaaggatc cgtaatccca acccaacaag agacacccga
1751 agtctcagaa ggagccaaat accaaaagta ttcttggcct aaccacaatg
1801 taggaaatcc tgaactagga agttctggag ttaaaaaccc ggtgtactgg
1851 cctccaacca gttttccatc atgagtttta aacctactcc taaaaatggt
1901 caatgaccta gaggaaattt tcttcaataa gttaaacctt gatgaagaaa
1951 taagagatga agctcactat gaagaaattc aagagctagt ccaaatactc
2001 tccatggaag accatgagat tgaggaaaaa ttcatcaata atgaaaacct
2051 gagaaacaga tacttctcga aagaagaatc taactctctt atgaaaatag
2101 tttccaactc agaagatgca gaaatctctg aacccgaaac tgaaaatcag
2151 gaaactgatt attccactga ggagtcaatt gacttcagtg aagaggaaga
2201 acttcttgaa caattggata atttatttcc agtcaatcag gaaactcaac
2251 ctaataacaa gaggcatgct gaggagcaac cctctacctc tggtactgga
2301 aagtactaca gagcaccttt tcaaaaggga actccaggtg ataggcctag
2351 agaaataggt acaatcaata ttgattgtat aggagacctt gatcttagaa
2401 gaaagatcat agacaaatgg ataaatgaga tagatctcat tgttcaaacc
2451 agtcccaatg actttactac ctcacggtct gttttagtct taatggaaca
2501 caggtctgat ggaatgatca gaaatttcat caaaaaggca tcatggagct
2551 cccagatgac aggctctcag acgccacaag atgttgctgc aggattatac
2601 accatgttcg taggtgttga ctatgcaaca gatcaggcta accaaatcag
2651 gttagaaaaa gaaaaagcaa agcagacgtt aacaaacgct caactttgtg
2701 atatctgtct cttagacgat tttacctgtc tatttgagaa aaatctggtt
2751 cactttgaaa tgagtgaaat gccagcttgg gtagaaacat acctaagaaa
2801 aataccaatt gtaggtgaaa tatctaggat gatttacaat gaaactaaat
2851 cacctgcaac tacatattct ttagcatttg ctacaagaat tgtaaaaaca
2901 gaaatagcta aaatctgcga agctagatca aaagctaaac aactgaaaag
2951 attcagccaa tgttgcaaaa agctctctat caatgatagt gagaataacc
3001 agtttggttg caacaaacca tcatactcat ccaagaggaa gaagtatgaa
3051 aaatccagaa gaaaagtctg gaaaaagact aaaagaaaat ttgctcctag
3101 caaatatttc aagagaaagt cttcaaaaaa ggataaaaat cctagaaaaa
3151 acttctgtcc acagggtaag aagaaatgca ggtgttggat ctgctcagaa
3201 gaaggacatt atgccaatga gtgtccaaac agaagtaaga accctgaaag
3251 ggtaaaaatc cttattaagg gataccaaca ggactatgag cccgttgaag
3301 atatgtacga aggtacatta cacgtctact cttatgagta tgacacagat
3351 tcagaatgaa aagaaacact cttttcaaat ggggggagtt ttcacccaat
3401 aaattctgca atcttgcaaa caaaactaac ccaaattcaa tttacattga
3451 agcaaaggtt aagtttaagg gctaccaaac cctcagttta cactgctatg
3501 ttgacacagg agcgagtcta tgtcttgcaa gtaaacatgt tatcccagat
3551 gacttttggg aaaatgctcc gagaagcata ccggttaaaa ttgctaacca
3601 aagctctatt actttgaata aagtgtgcag gggcttgaag atcaatattg
3651 caggaaatga attcttcatt cctacgatat atcagcagga aacaggtatt
3701 gacatccttt taggaaataa tttctgtcaa acctaccaac cattcatcca
3751 atgggtggat catattgctt tccacattaa ggaaaacaat gaggaaaaaa
3801 gggttttaat ccctaaagtc cgaattgcca tgcgcaaagg acacccaggc
3851 ttccttgagg ctatgagaaa aggatcagga aagaaacctg ttccaggaac
3901 caatattacc caagaggtaa ttgacgatga agaaaaaggc ttcattgaaa
3951 tctctaaatt tagagaaata gaacaattac ttgagaaagt atgttcagaa
4001 aatccaatcg atccagaaaa atcaaagggt tggatgaagg ctgaaatcaa
4051 gctgattaag ccagaaactg ttgtaagggt aaaaccaatg gtttacagcc
4101 ctgaagatag aaaagaattt gagattcaga ttaaggaatt acttgacctt
4151 aaggttatca ttcccagcaa atctcaacat atgtccccag cttttcttgt
4201 tgaaaaagaa gcagagaagc ggagaggtaa gaaaagaatg gtagttaact
4251 acaagaagtt aaatgaggta accataggtg attctcataa cctaccaaac
4301 atgcaagagt tgattactct actcagagga aaaaacattt ttagtagttt
4351 cgactgcaaa agtggttttt ggcaagtcct cttagatgat gaatcgcaga
4401 aacttactgc attcacatgt ccacaaggac actaccaatg gagagttgtg
4451 ccatttggct taaaacaagc tccaagtatc ttccaaagac acatgcaaga
4501 cgctctgcgt ggtctagaag aattcagtct ggtttatgta gatgatataa
4551 tcgtcttctc agacaataaa aatgatcatc aagatcatgt catgaaagtc
4601 cttaggagaa ttgaaagctt aggcattatt ctctcaaaaa agaaggctaa
4651 tcttttcaaa gaaaagatta atttccttgg attggaaata gataggggaa
4701 cccatacccc tcagaaccat attttggatc atattcacac tttccctgac
4751 aggattgagg ataagaagca acttcaaagg tttcttggag ttctaacata
4801 tgcagatagc tatatcccaa agcttgcaga aaaacggaaa ccgttacagg
4851 taaagttgaa gaaagatcag gtatggatct ggacgcaatc agatactgat
4901 tacgttaaaa agataaagaa aggattaatt aattttccaa aactttatct
4951 accaaagaaa gaagacagtt taattattga aactgatgct tctgatcact
5001 tctggggtgg agtccttaag gcccaaacca ctgaaggtga agaattaatc
5051 tgcaggtatt cttcaggaac attcaaacca gcagaattga attaccatag
5101 taatgagaaa gaattactag cggtaaaaca ggtgattact aaatttagta
5151 tttatctaac ccctgtttgt tttacagtca ggacagataa tgtaaatctt
5201 ttaaaaggat ttatgaataa aaagattact ggtgacagta aacagggaag
5251 gctaataaga tggcaaatgt ggttttcaca ttacaccttt aaggtggacc
5301 acctaaaagg agaacaaaat gtgctggctg attatctcac cagagaattc
5351 cacaatggaa acgtcatcca tgacgactaa acctgccatt tttcggctat
5401 aaaaactggg tttttccaaa tgaaaattcc acacaaaaca catccttttt
5451 tcaaaggggg ggaattaaat caaaaacagg aaaaacaaaa accagtaatg
5501 gaaaaagagc ttcaggctct aaggatcaaa gaaaagatcc tcttggtaga
5551 actcgattct atcagaaaac aaatcagcat ttacgctgaa ctaactggaa
5601 gtttagacca ggaaggctct gcctcacact ctaaacctag tccacagcaa
5651 acggctgatg gtaaagacgg ctcaaatccg ttaaaccctg atgctttggg
5701 aaaaagcata acggagaact tggttccaag tcctgagaag gatgaatcca
5751 agaaagttgt cagtttacga aaaactgaaa gtgggttgta tatccccacg
5801 actagtccgg ttgcaaacgg ctccggtaaa gacacaacaa atccgttgac
5851 agctgacact ttgctaaaaa gtgataatga ggatataaac ctcaggcctt
5901 catacgcaag tatgatgatg aaaaagccac taccggctga aaaattctat
5951 gtggtctaca atggtgatca cccaggaatt tacacagatt gggcgcacgt
6001 tcttaaagcc tcctccagtc aaaaaggaat tatcatcaaa aaattcctga
6051 gttttgcaga agccaacatc tctgcatcaa aatactctat cagacatgga
6101 ggaataatca agtataaggg accaatccct atactcccaa agaaggaagc
6151 tgctgctcca agaagaaggc ttgttcaaaa gccagaagag aaaaaggaag
6201 accatttccc aaaggtttcc tttgaacaat ttatctctct atggagaaaa
6251 gccagagata cagtcccaga agactatgtc aaggaacaat actggacaga
6301 tgacaaaaat tccagaagtc tgttcatatt cggtccaaac gccgatccag
6351 ttctagtctt tgcggcattc aacgccggac tgataaaaac aatttatcct
6401 tcgggcaacc tccaggagat aaaagaattc cccagtgaat tcaagaaagc
6451 agtcaagact ttcaggtcca agattgcaaa ggctaaagat gcaaatatct
6501 ttatccgagt aacttcaagt ctcccagatt gggaaaaaga agaagattat
6551 cagggatatc atttccttga aattggtcta gctcaagaac gagaattcag
6601 gccatctgaa agaatggaag attcagaaaa tctccatcaa caaataatcc
6651 aagtaaggat taatggattg atcaacatcc ttaccgctat gggtaagatt
6701 gatgaaaagt caaaaacaaa aatcaattat gcacaccagc atgtgttgat
6751 caccagctat tgtgggacac caatttcgtc cacagacatc aacatcttat
6801 cgtcctttga agataagata ataatgttga agataagagt gggagccacc
6851 actaaaacat tgctttgtca aaagctaaaa aagatgatgc ccgacagcca
6901 cttgtgtgaa gcatgtgaag ccggtccctc cactaagaaa attagtgaag
6951 catcttccag tggtccctcc actcacagct caatcagtga gcaacaggac
7001 gaaggaaatg acgtaagcca tgacgtctaa tcccacaaga atttccttat
7051 ataaggaaca caaatcagaa ggaagagatc aatcgaaatc aaaatcggaa
7101 tcgaaatcaa aatcggaatc gaaatctctc atctctctct accttctctc
7151 taaaaaacac ttagatgtgt gagtaatcac ccacttgggg ttgtaatatg
7201 tagtagtaaa taagggaacc ccttaggggg tataccattg ttgtaatatt
7251 attttcagta tcaataaaat aatctttcag tttatcttat attcatttgt
7301 gtgacaccgt attcccataa aaccgatcct aatctctcct aacaaggtct
7351 gtcctggagc gcctgattcc ccgatcttgg cggagtaccg tgtttaggca
7401 gagggccgtt ttagggaaag atgccatact gtgggttggt gttggacgtt
7451 agggcctaaa ttggagaagt ggaaggaatg ggaagaaggt gaactaaaga
7501 atcatgagat aaacaggggt tagatttatt ttctgtgatc tgatcatact
7551 attccaacag gtatataatt ccagttttac ttactatcat attacatacc
7601 caagtaatca aacatcttga aaaagaaaag aaagaaaagg aaaatctcat
7651 tgagattaaa aacagatgaa tctaagctca acagagctca tagccatctt
7701 attggcacct gataaagcca tcctactggc aaaaaaccta ctggagaacc
7751 cagttaaaaa tgaaagacgt aatgaacctt tcatctatag cctccctagg
7801 cacgcagagc atcccatgct cccagaaatt ccgctgtggc aaatcttctg
7851 cccgact