Sequence of DPV Passion fruit yellow mosaic virus
Passion fruit yellow mosaic virus polymerase protein gene, partial cds; and coat protein gene, complete cds.
ACC No: AF467107
Dated: 2005-04-15 | Length: 1115 | CRC: 1049763483
!!NA_SEQUENCE 1.0
ID AF467107 standard; genomic RNA; VRL; 1115 BP.
XX
AC AF467107;
XX
SV AF467107.1
XX
DT 07-FEB-2002 (Rel. 70, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Passion fruit yellow mosaic virus polymerase protein gene, partial cds; and
DE coat protein gene, complete cds.
XX
KW .
XX
OS Passion fruit yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae;
OC Tymovirus.
XX
RN [1]
RP 1-1115
RA Morales F., Lozano I., Castano M., Arroyave J., Velasco A., Varon F.;
RT "Partial characterization of a Tymovirus infecting passion fruit in
RT Colombia, South America";
RL Unpublished.
XX
RN [2]
RP 1-1115
RA Morales F., Lozano I.;
RT ;
RL Submitted (10-JAN-2002) to the EMBL/GenBank/DDBJ databases.
RL Unidad de Virologia, International Center of Tropical Agriculture, Cali,
RL Colombia
XX
FH Key Location/Qualifiers
FH
FT source 1. .1115
FT /country="Colombia"
FT /db_xref="taxon:185692"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Passion fruit yellow mosaic virus"
FT CDS <1. .250
FT /codon_start=2
FT /db_xref="UniProt/TrEMBL:Q8QY75"
FT /note="replicase; ORF1"
FT /product="polymerase protein"
FT /protein_id="AAL76048.1"
FT /translation="SACFDFFCRNAKPFEKALLSSSEIPLQHLSKLTQSSKWLSQTAVS
FT SLPLRLLKQLLPKXQNSDFHFDPKVSLLESELLHSFQ"
FT CDS 254. .820
FT /codon_start=1
FT /db_xref="GOA:Q8QY74"
FT /db_xref="HSSP:1DDL"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="UniProt/TrEMBL:Q8QY74"
FT /note="CP; ORF3"
FT /product="coat protein"
FT /protein_id="AAL76049.1"
FT /translation="MSSSSLVTSLVSQQTPINTKSDSIPLEPGNAPPVIKLPFQTKLAS
FT LGTAEVSDSVSIAANAAVSSLATPYRHARLTSLVATIHPNHLSPSNPTTVSLVWVPFNS
FT TATSSDILNVFGGQSFCIGGAVNSLAAISVPCNLTNVNPVIKSSKLPPSHRLFPNSTPR
FT LPAHRSSSPFKEVPPHSPLRSQPHT"
FT misc_feature 819. .1115
FT /note="contains five-stem tRNA-like secondary structure"
XX
SQ Sequence 1115 BP; 240 A; 390 C; 212 G; 272 T; 1 other;
AF467107 Length: 1115 April 19, 2005 08:48 Type: N Check: 2143 ..
1 aagcgcatgc ttcgatttct tttgcagaaa tgccaaacct ttcgaaaaag
51 cgcttctttc ttcctccgag attccgttgc agcacctatc caagctgaca
101 caatcctcaa aatggctctc acaaaccgcc gtctcctctc ttcctctccg
151 gctgctgaag caacttctgc cgaagcycca aaactccgac ttccactttg
201 accccaaagt ttccctccta gagtctgaat tgcttcactc atttcaatga
251 gccatgtctt ccagttctct agtcacttct ctggtctccc agcaaactcc
301 catcaacacc aaatctgact ccattcctct cgaacccggc aacgctcccc
351 ccgtcatcaa gctgcctttc caaaccaagc ttgcctccct cggcactgct
401 gaggtctccg actccgtaag cattgccgcc aacgccgccg tctcttctct
451 cgccacccct taccgccacg ctcgactcac ctctctcgtc gccaccatcc
501 accccaacca tctctctccc tccaacccaa cgaccgtctc tctcgtttgg
551 gttccattca actctactgc cacctcctcc gacattctca atgtctttgg
601 tggccaatct ttctgcatag gcggagctgt caattctctc gccgccatct
651 ccgttccctg caacttgacc aacgtcaacc ccgttatcaa atcctcgaaa
701 ctaccacctt ctcaccgcct ctttcccaac tcgactccgc gtctccccgc
751 ccaccgatct tcctctccct tcaaagaagt gcctcctcac agccctctcc
801 gaagtcagcc acatacctga aaccagactg tggttggcct tacaagagct
851 tctccctgac agccttcttc aaaattctga aatctccacc tacggcctct
901 ccaccgacgt cgcttggaga tggacgcagg gaggagagcg ggatctttgg
951 cgggggaatg acgagcagca attagcgagg agggctggca ggacaggtgg
1001 aaaggttggt gcagccaagg gaattggttg cttttgaggt cttgaaagag
1051 gatctctttc aaatcagggt cgtgggcggg aaggaagaaa gcagcgagat
1101 tttcgaaagt ctcac