Sequence of DPV Latino virus
Latino virus strain Maru 10924 segment S, complete sequence.
ACC No: AF485259
Dated: 2003-06-20 | Length: 3475 | CRC: 2007248993
ID AF485259; SV 1; linear; genomic RNA; STD; VRL; 3475 BP.
XX
AC AF485259;
XX
DT 18-SEP-2002 (Rel. 73, Created)
DT 20-JUN-2003 (Rel. 76, Last updated, Version 3)
XX
DE Latino virus strain Maru 10924 segment S, complete sequence.
XX
KW .
XX
OS Latino virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-3475
RX DOI; 10.1006/viro.2002.1695.
RX PUBMED; 12504568.
RA Archer A.M., Rico-Hesse R.;
RT "High genetic divergence and recombination in Arenaviruses from the
RT Americas";
RL Virology 304(2):274-281(2002).
XX
RN [2]
RP 1-3475
RA Archer A.M., Rico-Hesse R.;
RT ;
RL Submitted (20-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620
RL NW Loop 410 @ Military Dr, San Antonio, TX 78227, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3475
FT /organism="Latino virus"
FT /segment="S (small)"
FT /strain="Maru 10924"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:45221"
FT gene 90. .1637
FT /gene="GPC"
FT CDS 90. .1637
FT /codon_start=1
FT /gene="GPC"
FT /product="glycoprotein precursor"
FT /db_xref="GOA:Q8B121"
FT /db_xref="InterPro:IPR001535"
FT /db_xref="UniProtKB/TrEMBL:Q8B121"
FT /protein_id="AAN09940.1"
FT /translation="MGQVIGFFQSLPEIINEALNIALICVALLATIKGMVNIWKSGLIQ
FT LLFFLTLAGRSCSHSFTIGRFHEFQSVTVNFTQFMSYAPSSCSVNNTHHYFKGPQNTTW
FT GLELTLTNESMINITNSMRVFTNIHHNVTNCVQNISEHEGVLKWLLETMHLSISKPGKH
FT IAPVMCERQKGLLIEYNLTMTKDHHPNYWNQVLYGLAKLLGSSKRLWFGACNKADCQMQ
FT SDHQHIKCNYSNCKGYTSFKYLIIQNTTWENHCEYNHLNTIHLLMSPIGQSFITRRLQA
FT FLTWTLSDALGNDLPGGYCLEQWAVVWFGIKCFDNTAMAKCNQNHDSEFCDMLRLFDYN
FT RNAIQSLNDQSQARLNLLTNTINSLVSDNLLMKNKLRELMNVPYCNYTRFWFINDTKNG
FT RHTLPQCWLVSDGSYLNETRFRTQWLSESNSLYTEMLTEEYEKRQGRTPLSLVDLCFWS
FT TLFYISTLFAHLVGFPTHRHLIGEGCPKPHRLTGSGICSCGHYGIPGKPVRWTKMSR"
FT gene complement(1727. .3401)
FT /gene="NP"
FT CDS complement(1728. .3401)
FT /codon_start=1
FT /gene="NP"
FT /product="nucleocapsid protein"
FT /db_xref="GOA:Q8BDE6"
FT /db_xref="InterPro:IPR000229"
FT /db_xref="UniProtKB/TrEMBL:Q8BDE6"
FT /protein_id="AAN09941.1"
FT /translation="MSGASEVPSFRWTQSLRRGLSHFTTSAKGDVLRDAKSLVDGLDFN
FT QVSQVQRVMRKDKRSDDDLSKLRDLNRSVDSLMVMKNKQNNVSLKIGSLSKDELMDLAT
FT DLEKLKRKINLGDRQGPGVYQGNLTSAQLEKRSEILKSLGFQPRANQNGVVKVWDIKNP
FT KLLINQFGSIPALTIACMSVQGAEQMNDVVQGLTSLGLLYTVKYPNLDDLDKLSKDHPC
FT LEFITKEESANNISGYNLSLSAAVKAGACLVDGGNMLETILVKPDNFQDIVKSLLVVKR
FT QEKMFVNEKPGLRNPYENILYKLCLSGEGWPYIGSRSQIVGRAWENTTVDLSKEVVYGP
FT SAPVKNGGNMRLSPLSDTQEAVIKEAIGKLDMDETIWIDIEGPPNDPVELAIYQPSTGN
FT YIHCFRVPHDEKGFKNGSKYSHGILLRDIENARSGLLSRILMRLPQKVVFTCQGSDDIQ
FT KLLQMNGRPDIATIDMSFSSEQARFFEGVVWEKFGHLCTRHNGVVLSRKKKGGNSGEPH
FT CALLDCIIFQAAFEGQVTGQIPKPLLPNSLIFKDEPRVAM"
XX
SQ Sequence 3475 BP; 970 A; 806 C; 694 G; 1005 T; 0 other;
af485259 Length: 3475 20-JUN-2003 Type: N Check: 5035 ..
1 cgcacagtgg atcctaggct taaaggatac gcttacagaa ggtagtctct
51 tctttgtaaa ggagagaatc ctttactaac tccagaacaa tgggtcaagt
101 gattggattc ttccaatcat tgcccgagat tattaatgaa gcgttgaaca
151 ttgctctgat ctgtgtggct ctgcttgcca caatcaaggg aatggtcaac
201 atctggaaat ctggtttgat acagctcctc ttcttcctca cattggcagg
251 aagaagttgt tctcattctt ttacaattgg aagatttcat gaatttcaga
301 gtgtgacagt taactttaca cagttcatgt cctatgctcc aagctcttgc
351 tcagtaaaca acacccacca ttatttcaaa ggtccccaaa acaccacctg
401 gggtcttgag ttgactttga ctaatgaatc aatgataaac atcaccaatt
451 ccatgagggt cttcactaac attcatcaca atgtaaccaa ttgcgtgcag
501 aacatttccg aacatgaggg tgtgctcaaa tggctgcttg agacaatgca
551 cctaagcatc agcaagccag gaaaacacat cgcacctgtc atgtgtgaga
601 gacaaaaggg gttgctcatc gagtacaatc tcactatgac caaagaccac
651 cacccaaatt attggaatca agtcttgtat ggactggcta aattattggg
701 ctcaagtaag cgtttgtggt ttggcgcatg taacaaggct gactgtcaga
751 tgcaatcaga ccaccagcac ataaaatgca attactcgaa ttgcaaaggt
801 tacaccagct ttaaatactt aattattcaa aataccactt gggaaaacca
851 ttgtgagtat aaccatctga acaccatcca ccttctcatg agccctattg
901 gccaatcctt tatcacaaga aggcttcaag cctttttaac ctggacactt
951 tctgatgcac tagggaatga ccttcctggg ggatactgtc ttgaacagtg
1001 ggctgtggtg tggtttggca taaagtgttt tgataacaca gcaatggcca
1051 agtgcaatca gaatcatgat tcagagtttt gtgatatgct aaggcttttt
1101 gattacaata gaaatgctat tcagagctta aatgatcaat ctcaagccag
1151 attaaacctt ttaactaaca ccattaattc acttgtctct gacaatttac
1201 taatgaaaaa taagctaaga gaactaatga acgtgccata ctgtaattac
1251 actagattct ggtttattaa tgatacaaag aatggtagac acactcttcc
1301 acaatgttgg ttggtatcag atggttcgta cttgaatgaa accagattca
1351 gaactcaatg gctaagtgaa agtaactctt tatacacaga aatgctgact
1401 gaagaatatg aaaaaagaca gggtagaaca cctctttctt tagtggacct
1451 atgcttttgg tcaactctct tttacatatc aacattattt gcgcatttag
1501 tgggtttccc aactcacaga caccttatag gtgagggctg cccaaaacca
1551 cacagattaa cagggtcagg gatctgctca tgtggacatt atggtattcc
1601 aggtaaacca gtcagatgga caaagatgtc aaggtgagcc tcgacaccct
1651 ctcgtctcgg gcttggcccg agacgagggg gccgccccct cgacccacgg
1701 caaagccgtg ggtcgagggg gttgcattta catggcaact ctcggttcat
1751 ctttaaagat caagctgttc ggtaagagtg gttttggaat ttgacctgtc
1801 acctgcccct cgaaagcggc ttggaagatg atgcagtcca aaagtgcaca
1851 gtgtggttca ccactgttgc cacccttctt ctttctactc agcacaactc
1901 cattgtgtct tgtacacaag tgcccaaact tttcccacac aacaccttcg
1951 aaaaatctgg cctgttccga tgaaaaactc atatcaatgg tggcaatgtc
2001 tggtctccca ttcatttgca gcagtttttg gatatcatca gacccttgac
2051 aagtgaaaac cactttctga ggaagtctca ttaagatcct actcagaaga
2101 ccagatctag cattctcaat atcacggagc aagattccat gtgaatattt
2151 gctcccattc ttgaagccct tttcatcatg agggactcta aagcagtgta
2201 tgtagttccc tgtggaaggc tgataaattg ccagttccac tgggtcattg
2251 ggtgggcctt ctatgtcaat ccagatggtt tcatccatgt ccagtttccc
2301 aatggcttcc ttgatcacag cttcctgagt gtcagacaat ggactcagtc
2351 tcatattacc tccatttttt actggtgcag atggcccata caccacctcc
2401 tttgacaaat caactgtggt gttttcccac gcacgaccca caatctgaga
2451 tcttgatcca atatagggcc agccctctcc tgagagacac aacttgtaga
2501 gaatgttttc atatggattc cttagtccag gtttctcatt cacgaacatc
2551 ttttcctgac gcttgacaac aagtaaactt ttcacaatat cttggaagtt
2601 gtcaggtttg accaagattg tttccaacat gttaccacca tccaccaagc
2651 aagcaccagc ttttacagct gctgatagac tgaggttgta accagatatg
2701 ttattagcgc tttcctcttt ggtgatgaac tcaagacagg gatgatcttt
2751 gctcaacttg tctaaatcat ctagattggg gtacttaact gtgtatagga
2801 gacccaaaga tgtcagccct tgaacgacat cattcatctg ctctgcacct
2851 tgcactgaca tgcatgctat cgtcaaagct ggaattgagc caaactggtt
2901 gattaacagc tttgggttct tgatgtccca aactttgaca acaccgtttt
2951 gattggctct tggttgaaag cccagagact taagaatctc tgaacgtttt
3001 tctagttgtg ctgatgttaa gttcccttga tagacaccag gtccttgcct
3051 atctcctagg ttaatcttcc ttttcaactt ctccaggtct gttgcaagat
3101 ccatgagttc atccttggac aggcttccga tcttgaggct gacattattc
3151 tgcttattct tcatcaccat taaactgtca acagatctat tgaggtctct
3201 caacttagaa agatcatcat ctgatctctt gtcctttctc atgaccctct
3251 gaacctgaga aacttggttg aaatccaaac catccaccag tgatttggca
3301 tccctcaaga catctccctt tgctgatgtg gtgaagtgac tcagtcccct
3351 tctgagagac tgagtccatc tgaagctggg aacctcactg gcaccagaca
3401 tgatggaaaa gtctgtgtat aagaagtaag tcaaagtgca aagcgttatc
3451 ctaaatgcct aggatccact gtgcg