Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate VNW-38 coat protein (cp) gene, partial cds.

ACC No: AF506853

Dated: 2002-09-24 | Length: 849 | CRC: 1883339332

                
ID   AF506853   standard; genomic RNA; VRL; 849 BP.
XX
AC   AF506853;
XX
SV   AF506853.1
XX
DT   24-SEP-2002 (Rel. 73, Created)
DT   24-SEP-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate VNW-38 coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-849
RX   PUBMED; 12237441.
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   "On the evolution and molecular epidemiology of the potyvirus Papaya
RT   ringspot virus";
RL   J. Gen. Virol. 83(Pt 10):2575-2585(2002).
XX
RN   [2]
RP   1-849
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   ;
RL   Submitted (29-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   School of Life Sciences, Queensland University of Technology, 2 George St,
RL   Brisbane, Queensland 4000, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .849
FT                   /country="Viet Nam"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="VNW-38"
FT                   /specific_host="pumpkin"
FT   CDS             <1. .849
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8BD84"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8BD84"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAN17200.1"
FT                   /translation="GLNEKLKEKEKQKEEKDKQKDKQKDVNNDGASDGNDVSTSTKTGE
FT                   RDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQS
FT                   QFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIKP
FT                   LIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVN
FT                   SKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMR
FT                   N"
XX
SQ   Sequence 849 BP; 300 A; 153 C; 201 G; 195 T; 0 other;

af506853 Length: 849  24-SEP-2002  Type: N  Check: 9550  ..

       1  ggtcttaatg agaagctcaa agagaaagaa aaacaaaaag aagaaaaaga
      51  taaacaaaaa gacaaacaaa aggatgtaaa caatgatgga gctagcgacg
     101  gaaacgatgt gtcgactagc acaaaaactg gagagagaga tagagatgtc
     151  aatgccggaa ctagtggaac tttcacagtt ccaaggataa agtcatttac
     201  tgataagatg attttaccaa gaattaaggg gaaaactgtc cttaatttaa
     251  atcatcttct ccagtataac ccgcaacaaa ttgacatctc aaacactcgt
     301  gccactcaat ctcaatttga aaagtggtat gagggagtga ggaatgatta
     351  cggtcttaac gataacgaaa tgcaagtgat gttaaacggt ttgatggttt
     401  ggtgtatcga aaatggtaca tctcccgaca tatctggtgt ctgggtaatg
     451  atggatgggg aaacccaagt cgattatccc atcaaacctt taattgaaca
     501  cgcaactccg tcgttcaggc aaattatggc tcacttcagt aacgcggctg
     551  aggcatacat cgctaagagg aatgcaactg agaggtacat gccgcggtat
     601  ggaatcaaga ggaatttgac tgacattagc ctcgctagat atgctttcga
     651  tttctatgag gtgaattcaa aaacacctga tagggctcgt gaagctcata
     701  tgcagatgaa ggctgcagct ctgcgcaata ctaatcgtag aatgtttgga
     751  atggacggca gtgtcagtaa caaggaagaa aacacggaga gacacacagt
     801  ggaagatgtc aacagagaca tgcactctct cctgggtatg cgcaattaa