Sequence of DPV Rice stripe virus
Rice stripe virus isolate KM possible replication protein NS3 and nucleocapsid protein CP genes, complete cds.
ACC No: AF508912
Dated: 2003-05-29 | Length: 2497 | CRC: -1453650542
!!NA_SEQUENCE 1.0
ID AF508912 standard; genomic RNA; VRL; 2497 BP.
XX
AC AF508912;
XX
SV AF508912.1
XX
DT 09-JUN-2002 (Rel. 72, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Rice stripe virus isolate KM possible replication protein NS3 and
DE nucleocapsid protein CP genes, complete cds.
XX
KW .
XX
OS Rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2497
RA Wei T.Y., Wang H., Lin H.X., Wu Z.Z., Lin Q.Y., Xie L.H.;
RT ;
RL Submitted (03-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL Fujian Agricultural and Forestry University, The Institute of Plant
RL Virology, Fuzhou, Fujian 350002, China
XX
DR GOA; Q8JRD0.
DR SPTREMBL; Q8JJG3; Q8JJG3.
DR SPTREMBL; Q8JRD0; Q8JRD0.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2497
FT /country="China"
FT /db_xref="taxon:12331"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Rice stripe virus"
FT /isolate="KM"
FT /segment="3"
FT CDS 66. .701
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8JJG3"
FT /product="possible replication protein NS3"
FT /protein_id="AAM49586.1"
FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAGL"
FT CDS complement(1437. .2405)
FT /codon_start=1
FT /db_xref="GOA:Q8JRD0"
FT /db_xref="SPTREMBL:Q8JRD0"
FT /product="nucleocapsid protein CP"
FT /protein_id="AAM49587.1"
FT /translation="MGTNKPATLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRAVTKKVKVAAGSTEASTLVSR
FT YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAERADD"
XX
SQ Sequence 2497 BP; 758 A; 523 C; 435 G; 781 T; 0 other;
AF508912 Length: 2497 September 11, 2003 13:48 Type: N Check: 8920 ..
1 acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc
51 cgacatcatc taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga
101 atttgatcat cctctgcttt tggagaatga tctgaccagt ttgagcataa
151 actgtgatga tgtccattgt tcttcaagag ccttatgtta catatatgac
201 attcattcat ctaggcaccc ctccattgat gagcatcagt ttctgaggct
251 tcttcatggc cctgatgatg ctgtcactct aggctccttc ttgaaaactc
301 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt
351 cctactataa tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa
401 gccaagaccc ccatcaacaa attgctggac atgcagaatg tccaaagaca
451 atttgccctt tactgttcct agtgtcaagg gatttcctcc agatgcagag
501 ctctacattg tgccaatatc tgatcatgat ggaaagcctg tcaagtttga
551 caataggaag actctatata gatcacctag taagaaaagg cataagtatg
601 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt
651 gattctagtg cactagaacc ctcaccaggc agctctccag cggggctgta
701 gttggataaa gaaaaaagag aggaaataaa aacaaaaacc aaaaaaacaa
751 caaaaaaatc ttaaaaataa aaaacaaaaa aactaaaaaa actaaaaaac
801 tggaaaacat cataatctaa aaatctacat accactggct gtctagtgga
851 ctctagttgg tagagaaagc tatgcttttg cccaaagcca tgattggcca
901 atctttaaaa tgtgctaagc acattatccg agggtgtctc ggatgttttt
951 ttacctaacc taattttttt gtatttttta tatatatttt ttgatttttt
1001 tgtttttata tacatatttt tgattttttt gtttttttga ttttttcatt
1051 tcttattatt aatatatatt ctcctaattg ctacatttat atatttactt
1101 agttatatac ttgatatata tagtatataa aatatacata ataaaataga
1151 gcaatacaat aaaactaata tcactatgtt acaagcttac atctgaatat
1201 ttagatagac ttatcaaact aaagacttta atagagagtg agcaataata
1251 atagcaataa atcatacaca aagcctaaaa ccacacagat aaaattattt
1301 atgtaatata attaaaaact aaaacatgca cattatatat acatattaac
1351 ttacacttaa agaaacaaca caccgtttga atacatgcgt cttctggggg
1401 gatatgagac ccccaacaac tgctgacctg ttcagtctag tcatctgcac
1451 gttctgcctc atcctcgaag aattccttca ccaacccgct gacttctgtt
1501 gctgtctttg aagtgttctc agcaaggatc ttcatcagct tactctgttg
1551 agccaagtac agcctggtct ggttcccata tgtactgatc gtgttgacag
1601 acataccagc cagtgcatcg aagattgtgg tcttcacttt cccattggtg
1651 atgaattcat ctaagacctt ctttctacca tcctccttct tcttgtcaat
1701 caagttcttt gacttgcatg tgatgaccag gagaccagtt gtgtacttca
1751 tcatgtctat gtcctttgtc agaccacgct ccttcttctt accctctggc
1801 atggtctttt tagttatttg gaaggagtga atgatgtgca caacaaacaa
1851 gatgtgactg agggagtgag ttgtgcagta aggagctgtt tcactctcca
1901 gtttgatgta ttgtggaaca tagtcccaca gcaggttgtc acatcctgtc
1951 agccccagat cagaagagtc aacagccatc ttaacaccag aaatttgtcg
2001 cacaacttca tgtgagacat ttgggaatag ctgagccaac cttccaagtg
2051 tgatggcatt ggcatttgat cccaccgagg acactatccc ataccttgat
2101 accaaggttg aagcctcagt gcttccagcc gccactttca ctttcttggt
2151 gacagctctc acaaagccag tgcctctcac atacctcatg gtgatgcaca
2201 tagtcatatc cttggccaat gtgtcaccac ctttgtcctt caatatgcca
2251 atcagagttg cagcatcata gcctgcatac tctatctgac cagcaaaagt
2301 cacaacatca gctttatgag cagtcaggta attcaacgca tcttttgaga
2351 tgtcattaat tgccttctgc aaatcagcta gagtggctgg cttgttggta
2401 cccattgtag caagaggtac tggaggaatg gttgcggctt agatgaaatt
2451 tggaatgtaa aagcaaaatc gaaaatttta ttacccagac tttgtgt