Sequence of DPV Rice stripe virus
Rice stripe virus isolate DW segment 3 putative replication protein NS3 and coat protein CP genes, complete cds.
ACC No: AF509500
Dated: 2003-05-29 | Length: 2480 | CRC: -1618999338
!!NA_SEQUENCE 1.0
ID AF509500 standard; genomic RNA; VRL; 2480 BP.
XX
AC AF509500;
XX
SV AF509500.1
XX
DT 27-MAY-2002 (Rel. 71, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Rice stripe virus isolate DW segment 3 putative replication protein NS3 and
DE coat protein CP genes, complete cds.
XX
KW .
XX
OS Rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-2480
RA Wei T.Y., Wang H., Lin H.X., Wu Z.J., Lin Q.Y., Xie L.H.;
RT ;
RL Submitted (03-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL Fujian Agricultural and Forestry University, The Institute of Plant
RL Virology, Fuzhou, Fujian 350002, China
XX
DR GOA; Q8JYK9.
DR SPTREMBL; Q8JYK9; Q8JYK9.
DR SPTREMBL; Q8JYL0; Q8JYL0.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2480
FT /country="China"
FT /db_xref="taxon:12331"
FT /mol_type="genomic RNA"
FT /note="RNA3"
FT /virion
FT /organism="Rice stripe virus"
FT /isolate="DW"
FT /segment="3"
FT CDS 66. .701
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8JYL0"
FT /product="putative replication protein NS3"
FT /protein_id="AAM34292.1"
FT /translation="MNVFTSSVGSVEFDHPLLLENDLTSLSISCDDVQCSSTALCYIYG
FT IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVL"
FT CDS complement(1420. .2388)
FT /codon_start=1
FT /db_xref="GOA:Q8JYK9"
FT /db_xref="SPTREMBL:Q8JYK9"
FT /product="coat protein CP"
FT /protein_id="AAM34293.1"
FT /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT YDAPTLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSREASTLVSR
FT YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ Sequence 2480 BP; 748 A; 530 C; 439 G; 763 T; 0 other;
AF509500 Length: 2480 September 11, 2003 13:48 Type: N Check: 106 ..
1 acacaaagtc ctgggtaaaa tagttatatt tttactatac aatacaattc
51 cgacatcatc taagtatgaa cgtgttcaca tcgtctgtgg gttctgtgga
101 atttgatcat cctctgcttt tggagaatga tctgaccagt ttgagcataa
151 gctgtgatga tgtccagtgc tcttcaacgg ccttatgtta tatatatggc
201 attcattcat ctaggcaccc ttccattgat gagcatcagt ttctgaggct
251 tctccatggc cctgatgatg ctgtcactct aggctccttc ttgaaaaccc
301 tgatctggat tctgtcccat gataagaatc tcccagaaga gtacagactt
351 cctactataa tgatgtcatc ctcatatgtg aagttcttca ctgaagtgaa
401 gccaagaccc ccatcaacaa attgctggac atgcagaatg tctaaagaca
451 atttgccctt caccgttcct agtgtcaagg gatttcctcc agatgcagag
501 ctctacattg tgccaatatc tgaccatgat ggaaagcctg ttaaatttga
551 caataggaag actctatata gatcacctag taagaaaagg cataagtatg
601 tcatttcttc tgataaacca cctcttagtg cacgttatgt taagtacgtt
651 gattctagtg cactagaacc ctcaccaggc agctctccag ctgtgctgta
701 gtaataaaaa gaaaaagaaa aagaaataaa acaaataatc caaaaaaaac
751 acacacaaaa aaatcttaaa aatgaaaacc acaaaaaaac caaaaaacta
801 aaaaaactaa aaaacatcat gacctaaaaa aacctgcaca ccactggttg
851 tctagtgggc tctagttggt agagaaagct atgcttttgc ctaaagccat
901 gattggccaa tccttaaaat gtgctaagca cattatccga agatgtctcg
951 gatgtttttt tacctaacct aatttttttg tatttttata taattttttg
1001 atttttttgt attttatata catatttttg ttttttgatt tttttgtttt
1051 taatattttt tcttctaatt actacattaa tatatttgat tattcatata
1101 cttaaaatat atagtatgta ttatacaaat agagcaatat aataaagcta
1151 gtacaactac attacaaaca tatatctaag tatttagata gacttatcaa
1201 actaaagact ctactagaga gtgagtaata ataatggcaa tacatcacac
1251 acaaagccca aaaccgcaca gacaaaataa cttatgggat ataatttaaa
1301 actaaaattg aaatgttata tatacatatt aacttacact taaaggaaca
1351 acacactgtt tgaagacatg cgtcttctag ggagatatga gatccccaac
1401 aactgctgac ctgttcagtc tagtcatctg caccttctgc ctcatcctcg
1451 aagaactcct tcaccaaccc gctgacttca gatgctgtct ttgaggtgtt
1501 ctcagcaagg atcttcatca gcttgctctg ctgagccaag tacagccttg
1551 tctgattccc ataagtgctg atcgtattga cagacatacc agccagcgca
1601 tcgaagattg tggtcttcac tttcccattg gtgatgaatt catctaagac
1651 cttctttctg ccatcttcct tctttttgtc agccaggttc tttgacttgc
1701 atgtgatgac caggagacca gttgtgtact tcatcatgtc tatgtctttt
1751 gtcagaccac gctccttctt cttaccctct ggcatggtct ttttggttat
1801 ttggaaggag tgaatgatgt gcacaacaaa caaaatgtga cttagggagt
1851 gagttgtgca gtaaggagct gtttcactct ctagtttgat atattgtgga
1901 acatagtccc acagtaggtt gtcacatcct gttagtccca ggtcagaaga
1951 gtccacagcc atcttaacac cagaaatttg tctcacaact tcatgtgaga
2001 cattagggaa tagctgagcc agccttccaa gtgtgatggc attggcattt
2051 gttcccaccg aggacactat cccatacctt gacaccaagg tcgaagcctc
2101 tctgcttcca gccgccactt tcactttctt agtgacatct ctcacaaagc
2151 cagtgcctct cacatatctc atggtgatgc acatagtcat atccttggcc
2201 agtgtgtcac cacctttgtc cttcaatatg ccaatcagag ttggagcatc
2251 atagcctgca tactctatct gaccagcaaa ggtcacaaca tcagctttat
2301 gagcagtcag gtaagacaac gcatctttgg agatgtcatt gattgccttc
2351 tgcaaatcag ctagagtggc tggcttgttg gtacccattg tagcaagagg
2401 tactggagga atggttgcgg cttagatgaa atttggaatg taaaagcaaa
2451 atcgaaaatt ttattaccca gactttgtgt