Sequence of DPV Cotton leaf curl Multan virus

Cotton leaf curl virus isolate HS-2 coat protein (AV1) gene, complete cds.

ACC No: AF521594

Dated: 2005-05-11 | Length: 771 | CRC: -1876216227

                !!NA_SEQUENCE 1.0
ID   AF521594   standard; genomic DNA; VRL; 771 BP.
XX
AC   AF521594;
XX
SV   AF521594.1
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   11-MAY-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cotton leaf curl virus isolate HS-2 coat protein (AV1) gene, complete cds.
XX
KW   .
XX
OS   Cotton leaf curl virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-771
RX   PUBMED; 15744566.
RA   Sharma P., Rishi N., Malathi V.G.;
RT   "Molecular cloning of coat protein gene of an Indian cotton leaf curl virus
RT   (CLCuV-HS2) isolate and its phylogenetic relationship with others members
RT   of Geminiviridae";
RL   Virus Genes 30(1):85-91(2005).
XX
RN   [2]
RP   1-771
RA   Sharma P.;
RT   ;
RL   Submitted (12-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Pathology, CCS, Haryana Agricultural University, Hisar,
RL   Haryana 125 004, India
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .771
FT                   /country="India:Hisar"
FT                   /db_xref="taxon:53010"
FT                   /mol_type="genomic DNA"
FT                   /virion
FT                   /organism="Cotton leaf curl virus"
FT                   /isolate="HS-2"
FT   gene            1. .771
FT                   /gene="AV1"
FT   CDS             1. .771
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8JQ16"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProt/TrEMBL:Q8JQ16"
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="AAM77352.1"
FT                   /translation="MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWT
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHR
FT                   IGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNSHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH
FT                   TENALMLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 771 BP; 221 A; 143 C; 191 G; 216 T; 0 other;

  AF521594  Length: 771  May 17, 2005 08:40  Type: N  Check: 3043  ..

       1  atgtcgaagc gagctgccga tatcgtcatt tctacgcccg cgtcgaaagt
      51  acgccggcgt ctgaacttcg gcagcccata caccagccgt gttgctgccc
     101  ccattgtccg cgtcacaaaa caacaggcat ggacaaacag gcctatgaac
     151  aggaagccca ggatgtacag gatgtacaga agtccagatg ttcctagagg
     201  atgtgaaggt ccatgtaagg ttcagtcgtt tgagtcgaga catgatgtcg
     251  ttcatattgg taaggtaatg tgtatttctg atgttactcg tggtgtcggt
     301  ttgacccatc gtattggtaa acgtttttgt gtcaagtcag tttatgtttt
     351  aggtaagata tggatggatg aaaatataaa gaccaagaat cacacgaatt
     401  cggtgatgtt ctttttagtc cgcgatcgac gtcctgttga caaacctcag
     451  gattttggtg aggtattcaa tatgtttgac aacgaaccta gtacagcaac
     501  tgtgaagaat agtcataggg accgttacca ggtgttgagg aaatggcatg
     551  caaccgttac gggtggtcaa tatgctagta aggaacaagc tttggtcaag
     601  aagtttgtca gagttaacaa ttatgttgtt tacaatcaac aggaagcagg
     651  gaaatacgag aatcatacgg aaaatgcgtt aatgctatat atggcttgta
     701  ctcacgctag caaccctgtt tatgctacgt tgaagattag gatatatttt
     751  tatgactcta taacgaattg a