Sequence of DPV Grapevine Red Globe virus
Grapevine Red Globe virus replicase RdRp gene, partial cds; and 25kDa coat protein (CP) and 17kDa proline rich protein (p17) genes, complete cds.
ACC No: AF521977
Dated: 2003-11-26 | Length: 2006 | CRC: 682867929
!!NA_SEQUENCE 1.0
ID AF521977 standard; genomic RNA; VRL; 2006 BP.
XX
AC AF521977;
XX
SV AF521977.1
XX
DT 12-OCT-2003 (Rel. 77, Created)
DT 26-NOV-2003 (Rel. 77, Last updated, Version 2)
XX
DE Grapevine Red Globe virus replicase RdRp gene, partial cds; and 25kDa coat
DE protein (CP) and 17kDa proline rich protein (p17) genes, complete cds.
XX
KW .
XX
OS Grapevine Red Globe virus
OC Viruses; unclassified viruses.
XX
RN [1]
RP 1-2006
RX MEDLINE; 22795429.
RX PUBMED; 12913354.
RA Ghanem-Sabanadzovic A., Sabanadzovic S., Martelli P.;
RT "Sequence analysis of the 3' end of three Grapevine fleck virus-like
RT viruses from grapevine";
RL Virus Genes 27(1):11-16(2003).
XX
RN [2]
RP 1-2006
RA Abou Ghanem-Sabanadzovic N., Sabanadzovic S., Martelli G.P., Digiaro M.;
RT ;
RL Submitted (17-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL Istituto Agronomico Mediterraneo, Via Ceglie 9, Valenzano, BA 70010, Italy
XX
FH Key Location/Qualifiers
FH
FT source 1. .2006
FT /db_xref="taxon:103723"
FT /mol_type="genomic RNA"
FT /organism="Grapevine Red Globe virus"
FT CDS <1. .1277
FT /codon_start=3
FT /product="replicase RdRp"
FT /protein_id="AAQ08825.1"
FT /translation="QHKVNEASIFSDWKACQTLALAHDAVILLLGPVKKYQRCFDNKAR
FT PSKIYYHASHTPFELSTWCQAHMKTQHHLTNDYTAYDQSQGGEAVVLERLKMLRVSIPQ
FT PLIDLHVHLKTNVDTQLGPLTSMRLTGEPGTYDDNSDYNLAVTAAKFILDPEVHAVLIS
FT GDDLDISPPPPVRPTWPILEAMLSLRFKTEVSRYGLFCGYYLGPAGAVRSPLALFAKLI
FT IAVDDGSIEDKKASYLSEFAVGHSLGQDMWTLLPENQVPYQSANFDFFCRNCPPSWKLA
FT LRIGSPDLSFLDSLNLATTHLTSATFAMLSFAARRLYKAFRPEKHFVSEVTMNSPHNTV
FT LLPDFNASIAHLSDTVPESSDFPLAHIDPASIPLDTLSIFRAADGISPLTRPSPLRASL
FT QDQCFPFRGSCAPAFGLGYSAWRPL"
FT gene 1153. .1860
FT /gene="CP"
FT CDS 1153. .1860
FT /codon_start=1
FT /gene="CP"
FT /product="25kDa coat protein"
FT /protein_id="AAQ08826.1"
FT /translation="MESLLSLAPLLSELLSKINASPSAAPAPQPLGSDILPGDRSDVRM
FT VAPPKLPPAPRSIHSSPPLASPYVDLPFQFIFYDLTNAETGFTSLDLASKPPFLSLTSP
FT YAYAVLQSLELTVFPKNPSYTYPMSFDAHWHSSSVSITGSQILSTYGGTRVTFGGPITS
FT SNPIILPADLRSTNPVVKDTVSYNNTPKLTVAFHKNTDAPAVSVTTPVIYGSIVIRGVV
FT RCSSVRATPYPVA"
FT gene 1355. .1867
FT /gene="p17"
FT CDS 1355. .1867
FT /codon_start=1
FT /gene="p17"
FT /product="17kDa proline rich protein"
FT /protein_id="AAQ08827.1"
FT /translation="MSTSPSSSSSMTSPTPRPASPPWTWPPSPPSFPSPAPMLTRSSNP
FT WSSPCSQRTPPTPTPCPSMPTGIPPQSPSPAPKSSPPTAAPVSPSVVPSPLPTPSSSQL
FT TSAPPTLLSRTLCPTTTPPSLRLPSTRIPTPQLSPSPPQSSTAPSSSAVLSVAPPSVPP
FT PTQSPSN"
XX
SQ Sequence 2006 BP; 364 A; 831 C; 349 G; 462 T; 0 other;
AF521977 Length: 2006 January 7, 2004 15:37 Type: N Check: 5403 ..
1 cccagcacaa ggtcaacgag gcctccattt tttctgactg gaaagcatgt
51 cagacccttg ctctcgccca cgatgctgtt atcctccttc tgggccccgt
101 caagaaatac cagcgttgct tcgacaacaa ggcccgcccc tccaagatct
151 actaccatgc ctcccacacc ccttttgagc tctccacctg gtgccaagct
201 cacatgaaga cccagcacca cctcaccaat gactacaccg cctatgacca
251 gtcccaaggc ggggaggcag tcgtcctcga gcgtctcaag atgctccgtg
301 tttccatccc tcagcccctc atcgatctcc acgtgcatct gaagaccaac
351 gtggacaccc aactcggccc cctcacctcc atgcgcctca ctggcgaacc
401 aggaacgtat gatgacaact ctgattacaa cctggccgtc actgcagcca
451 aattcatcct agaccccgag gtccacgccg ttctcatctc cggcgacgat
501 cttgacatct cccccccccc tccagtccgc cccacctggc ccattctcga
551 agccatgctc tcacttcgct tcaagactga agtctcccgc tacggtcttt
601 tctgcggtta ctatcttggc cccgctggag ccgtccgctc acctctggcc
651 ctctttgcca agctcatcat cgccgtcgac gacggttcca tcgaggacaa
701 gaaagcttca tatctctcag aatttgctgt cggccactcc ctcggtcagg
751 acatgtggac tctccttcct gagaaccaag tgccctacca atccgccaac
801 ttcgacttct tctgtcgaaa ctgtccaccc tcgtggaaat tggctctccg
851 cattggttcc ccagacctct ctttcctcga ctccctcaat ctcgccacta
901 cccatctcac ttctgccacc ttcgccatgc tctccttcgc cgcccgccgt
951 ctctacaaag ccttccgccc cgagaagcac ttcgtttcgg aggtcaccat
1001 gaactcccca cacaacactg tattgcttcc ggacttcaac gcctccatcg
1051 ctcacctctc tgacactgtg cccgagtcct ccgacttccc cctcgcccac
1101 atcgatccag cctccatccc cctcgacact ctctccattt tccgggccgc
1151 cgatggaatc tctcctctca ctcgcccctc tcctctccga gcttctctcc
1201 aagatcaatg cttccccttc cgcggctcct gcgccccagc ctttgggctc
1251 ggatattctg cctggcgacc gctctgacgt tcgcatggtg gctcctccga
1301 agcttccgcc cgcgccccgc tccatccact cttctccccc tctagcctct
1351 ccctatgtcg acctcccctt ccagttcatc ttctatgacc tcaccaacgc
1401 cgagaccggc ttcacctccc tggacctggc ctccaagccc cccttccttt
1451 ccctcaccag cccctatgct tacgcggtcc tccaatccct ggagctcacc
1501 gtgttcccaa agaacccctc ctacacctac cccatgtcct tcgatgccca
1551 ctggcattcc tcctcagtct ccatcaccgg ctcccaaatc ctctccacct
1601 acggcggcac ccgtgtcacc ttcggtggtc ccatcacctc ttccaacccc
1651 atcatcctcc cagctgacct ccgctccacc aaccctgttg tcaaggacac
1701 tgtgtcctac aacaacaccc ccaagcttac ggttgccttc cacaagaata
1751 ccgacgcccc agctgtctcc gtcaccaccc cagtcatcta cggctccatc
1801 gtcatccgcg gtgttgtccg ttgctcctcc gtccgtgcca ccccctaccc
1851 agtcgcctag caattaaccc cccaaaacca atgccagccc gaccgccccc
1901 cttccccaac ctcggtcctc tccggaccca gtggcctacg ttaagttagt
1951 aataaatagt agtgtgcagt ttccaagtct ctgctttgcc ccacttaaat
2001 ccccgc