Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus isolate Ca coat protein gene, complete cds.

ACC No: AF523339

Dated: 2003-01-31 | Length: 657 | CRC: -1897594138

                !!NA_SEQUENCE 1.0
ID   AF523339   standard; RNA; VRL; 657 BP.
XX
AC   AF523339;
XX
SV   AF523339.1
XX
DT   25-JUL-2002 (Rel. 72, Created)
DT   31-JAN-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Cucumber mosaic virus isolate Ca coat protein gene, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-657
RX   MEDLINE; 22421491.
RX   PUBMED; 12533721.
RA   Lin H.X., Rubio L., Smythe A., Jiminez M., Falk B.W.;
RT   "Genetic diversity and biological variation among California isolates of
RT   Cucumber mosaic virus";
RL   J. Gen. Virol. 84(Pt 1):249-258(2003).
XX
RN   [2]
RP   1-657
RA   Lin H.X., Rubio L., Smythe A., Falk B.W.;
RT   ;
RL   Submitted (21-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of California, Department of Plant Pathology,
RL   University of California, Davis, CA 95616, USA
XX
DR   SPTREMBL; Q9YJS2; Q9YJS2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .657
FT                   /db_xref="taxon:12305"
FT                   /organism="Cucumber mosaic virus"
FT                   /isolate="Ca"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9YJS2"
FT                   /product="coat protein"
FT                   /protein_id="AAM81361.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSVSSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 156 A; 170 C; 153 G; 178 T; 0 other;

AF523339  Length: 657  February 11, 2003 08:55  Type: N  Check: 3414  ..

       1  atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc
      51  gcgtcgtggt tcccgctccg tttcctcctc ctcggatgct aattttagag
     101  tcttgtcgca gcagctttcg cgacttaaca agacgttagc agctggtcgt
     151  ccaaccatta accacccaac ctttgtaggg agtgagcgtt gtaaacctgg
     201  atacacgttc acatcaatta ccctaaagcc accaaaaata gaccgcgggt
     251  cttattatgg taaaaggttg ttattacctg attcagtcac ggaatatgat
     301  aagaaacttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtga cagtccgtaa agttcctgcc tcctcggact
     401  tatccgttgc cgccatctct gctatgtttg cggacggagc ctcaccggta
     451  ctggtttatc agtatgctgc atctggagtc caagctaaca acaaattgtt
     501  gtatgatctc tcagcgatgc gcgctgatat aggcgacatg agaaagtacg
     551  ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga cgagctggta
     601  cttcatgttg acgtcgagca ccaacgcatt cccacgtctg gggtgctccc
     651  agtctga