Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus isolate C18 coat protein gene, complete cds.

ACC No: AF523342

Dated: 2003-01-31 | Length: 657 | CRC: 46177821

                !!NA_SEQUENCE 1.0
ID   AF523342   standard; RNA; VRL; 657 BP.
XX
AC   AF523342;
XX
SV   AF523342.1
XX
DT   25-JUL-2002 (Rel. 72, Created)
DT   31-JAN-2003 (Rel. 74, Last updated, Version 2)
XX
DE   Cucumber mosaic virus isolate C18 coat protein gene, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-657
RX   MEDLINE; 22421491.
RX   PUBMED; 12533721.
RA   Lin H.X., Rubio L., Smythe A., Jiminez M., Falk B.W.;
RT   "Genetic diversity and biological variation among California isolates of
RT   Cucumber mosaic virus";
RL   J. Gen. Virol. 84(Pt 1):249-258(2003).
XX
RN   [2]
RP   1-657
RA   Lin H.X., Rubio L., Smythe A., Falk B.W.;
RT   ;
RL   Submitted (21-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, University of California, Department of Plant Pathology,
RL   University of California, Davis, CA 95616, USA
XX
DR   SPTREMBL; Q8JPX3; Q8JPX3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .657
FT                   /db_xref="taxon:12305"
FT                   /organism="Cucumber mosaic virus"
FT                   /isolate="C18"
FT   CDS             1. .657
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q8JPX3"
FT                   /product="coat protein"
FT                   /protein_id="AAM81364.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGTLPV"
XX
SQ   Sequence 657 BP; 157 A; 169 C; 151 G; 180 T; 0 other;

AF523342  Length: 657  February 11, 2003 08:55  Type: N  Check: 5515  ..

       1  atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc
      51  gcgtcgtggt tcccgctccg cctcctcctc ttcggatgct aactttagag
     101  tcttgtcgca gcagctttcg cgacttaaca agacgttagc agctggtcgt
     151  ccaactatta accacccaac ctttgtaggg agtgaacgtt gtaaacctgg
     201  gtacacgttc acatctatta ccctaaagcc accaaaaata gaccgtgggt
     251  cttattacgg taaaaggttg ttattacctg attcagtcac ggaatatgat
     301  aagaagcttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt
     351  tgattctacc gtgtgggtga cagttcgtaa agttcctgcc tcctcggact
     401  tatccgttgc cgccatctct gctatgttcg cggacggagc ctcaccggta
     451  ctggtttatc agtatgctgc atctggagtc caagctaaca acaaattgtt
     501  gtatgatctt tcggcgatgc gcgctgatat aggtgatatg agaaagtacg
     551  ccgtcctcgt gtattcaaaa gacgatgcac tcgagacgga cgagctagta
     601  cttcatgttg acatcgagca ccaacgcatt cccacgtctg ggacgctccc
     651  agtctga