Sequence of DPV Thogoto virus
Thogoto virus strain SiAr126 segment 6, complete sequence.
ACC No: AF527531
Dated: 2003-05-29 | Length: 955 | CRC: -358010250
!!NA_SEQUENCE 1.0
ID AF527531 standard; genomic RNA; VRL; 955 BP.
XX
AC AF527531;
XX
SV AF527531.1
XX
DT 03-MAR-2003 (Rel. 75, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Thogoto virus strain SiAr126 segment 6, complete sequence.
XX
KW .
XX
OS Thogoto virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Thogotovirus.
XX
RN [1]
RP 1-955
RX MEDLINE; 22440045.
RX PUBMED; 12552016.
RA Hagmaier K., Jennings S., Buse J., Weber F., Kochs G.;
RT "Novel gene product of Thogoto virus segment 6 codes for an interferon
RT antagonist";
RL J. Virol. 77(4):2747-2752(2003).
XX
RN [2]
RP 1-955
RA Hagmaier K., Kochs G.;
RT ;
RL Submitted (08-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL Virology, University of Freiburg, Hermann-Herder-Strasse 11, Freiburg
RL 79104, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .955
FT /db_xref="taxon:11569"
FT /mol_type="genomic RNA"
FT /organism="Thogoto virus"
FT /strain="SiAr126"
FT /segment="6"
FT mRNA <21. .>935
FT /product="ML"
FT CDS 21. .935
FT /codon_start=1
FT /db_xref="UniProt/TrEMBL:Q80A33"
FT /note="interferon antagonist"
FT /product="ML"
FT /protein_id="AAO49497.1"
FT /translation="MASNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQ
FT SSDLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMYNPRELKRSYVQSLSSGTSCEFL
FT RSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLTSLALDDSPSAVV
FT YSGWQQEAIKLHNTIRKIATMRPADCKAGKFYSDILSACDQTKELLDAFDQGKLAYDRD
FT VVLIGWMDEIIKIFSKPDYLEAKGVSYQVLKNVSNKVALLRESIWWVTELDGREYLFFD
FT ESWYLHGMSAFSDGVPGYEDFIY"
FT mRNA join(<21. .820,901. .>901)
FT /product="M"
FT CDS join(21. .820,901)
FT /codon_start=1
FT /db_xref="GOA:Q805I1"
FT /db_xref="UniProt/TrEMBL:Q805I1"
FT /note="matrix protein"
FT /product="M"
FT /protein_id="AAO49498.1"
FT /translation="MASNLPVRSFSEVCCAEARAAIIQMENNPDETVCNRIWKIHRDLQ
FT SSDLTTTVQVMMVYRFISKRVPEGCFAILSGVNTGMYNPRELKRSYVQSLSSGTSCEFL
FT RSLDKLAKNLLAVHVCSDVKMSLNKRQVIDFISGEEDPTLHTAEHLTSLALDDSPSAVV
FT YSGWQQEAIKLHNTIRKIATMRPADCKAGKFYSDILSACDQTKELLDAFDQGKLAYDRD
FT VVLIGWMDEIIKIFSKPDYLEAKGVSYQVLKNVSNKVALLRESI"
XX
SQ Sequence 955 BP; 270 A; 221 C; 237 G; 227 T; 0 other;
AF527531 Length: 955 October 13, 2004 17:42 Type: N Check: 5946 ..
1 agtggaaaca ggcagtggag atggcttcca acctaccagt gaggtctttc
51 agcgaagtct gctgtgctga ggcacgggcg gctataatac agatggagaa
101 caaccccgac gaaaccgtgt gtaataggat ctggaagatc caccgggacc
151 tacagtcaag tgacctcacc accactgtgc aagtaatgat ggtgtatcgt
201 ttcatatcaa aacgggtgcc agaaggctgc ttcgccatcc tttctggtgt
251 gaacactgga atgtacaacc caagagagct taaacgaagt tatgtgcaat
301 ccctgtcttc aggaacctcc tgtgagtttc tgagatcatt agacaagcta
351 gcaaagaact tgctggctgt acatgtctgc tctgatgtga agatgtccct
401 caacaaaagg caggtgatag attttataag cggtgaagaa gatcccaccc
451 tccacacagc agagcatcta acaagcttgg ccctggatga cagcccttct
501 gcagtggtgt acagtggatg gcagcaggaa gcgatcaagc ttcacaacac
551 catcaggaaa attgctacga tgaggcctgc agactgcaaa gcagggaagt
601 tctactcgga catcttatcc gcctgcgacc agacaaaaga acttctagac
651 gccttcgacc agggaaaact tgcctatgac cgagacgtag tgctcatcgg
701 gtggatggat gagatcatca aaatcttctc aaaacctgat tatctggagg
751 cgaagggagt ctcatatcag gtcctcaaga acgtcagcaa caaagtcgcc
801 cttctccggg aaagcatttg gtgggttaca gaattagatg gaagagaata
851 tctcttcttc gatgagtctt ggtacttaca tggcatgtct gctttttcag
901 atggtgtgcc tggatacgaa gacttcattt actaaaaaac tgccttgatt
951 tctct