Sequence of DPV Barley mild mosaic virus
Barley mild mosaic virus segment RNA1, complete sequence.
ACC No: AF536942
Dated: 2003-08-28 | Length: 7273 | CRC: -373470363
!!NA_SEQUENCE 1.0
ID AF536942 standard; genomic RNA; VRL; 7273 BP.
XX
AC AF536942;
XX
SV AF536942.1
XX
DT 28-AUG-2003 (Rel. 77, Created)
DT 28-AUG-2003 (Rel. 77, Last updated, Version 1)
XX
DE Barley mild mosaic virus segment RNA1, complete sequence.
XX
KW .
XX
OS Barley mild mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-7273
RA Lee K., Choi M., Lee W.;
RT "Nucleotide sequence of barley mild mosaic virus RNA 1";
RL Unpublished.
XX
RN [2]
RP 1-7273
RA Lee K., Choi M., Lee W.;
RT ;
RL Submitted (09-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL Department of Agricultural Biology, Bioresources Science College of
RL Agriculture, Chonbuk National University, 664-14 1-ga, Deokjin-dong,
RL Chonju, Chonbuk 561-756, Korea
XX
FH Key Location/Qualifiers
FH
FT source 1. .7273
FT /db_xref="taxon:12466"
FT /mol_type="genomic RNA"
FT /organism="Barley mild mosaic virus"
FT /specific_host="barley cultivar baegdong"
FT /segment="RNA1"
FT CDS 149. .6934
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AAQ10758.1"
FT /translation="MEEFIPEVFYQNQVQSLKKILKSWKRGTSIYAYLAREQEVLAFLV
FT LSPAHIAKLNKLLTEESARCALLAQNCETIEALAVVRQALQGVTLHFGDNGMEKGWLHM
FT MKALDACLDESFSENAAALKKSIQAVGHKLIAAKNRIESCERSVNHLTTFQFAREYGLS
FT TTYFEKLSNFGGHIRSFVWSSDSGEISQRPRKRNHHIRRAFRHSRATTGVSFGATASGS
FT SVPSGLPARWCFNSAVFIWSLCGVLNLSMVVLQFTLKRHFGKFYFRYIMSGVLAICAVC
FT CVHLKNRKGPILQASQKDKRFIGILAFCITVIYMFDVDLADSLSNNLHKISRLVNLFLD
FT DNRGFATPALDNLTDFTTILQSGTSSDDLKIVQDTLAVVLQVDDEDATQDDAIYDSDGL
FT QTFKQWVSHNQLAGMQLARPLQYPCSNTYGLTADNVAELATSMAQEAKQWSQVVGHTGS
FT GKSTRLPTAYANCLKGLAGRKKNVLVCEPTRAATVNVTSGISQNFGRLVYGRHEGWSNL
FT GDKTIQVMTYGSALAAWKVDNKFLSQFDAVFLDESHLITTHALVFESICQEATNVRKFY
FT VSATPRDGKKCPEAVRRYEIKTVKSECSSIDTFVRSQEKENSLYVLKHDTVLVFLAGKA
FT ECDRAASNWNKLYSTNMYAYSLTGDNFTVAYENIVTRMLTDRIIVFCTNILETGVTLNV
FT DCVVDFGFTMRPELDLVDKSLTLMRRRVTENERAQRIGRAGRLRTGHAICIGNPETRHD
FT LVPPETLYEAALLSFVHGVQFYINEHFENAWIEGVTKSQASVMTQFKLSPFLMRDIVRD
FT DGAIPLSLHKILKDYTHRNTDLIGTKLSVMSHVYNSWPLYRTVHQSIFRGDSNVPQALK
FT HARVPFNVSTAHDFPWENFAQACLEFQPRVLQVFSDSSSTSRIINLQIGKMHIVNSMEE
FT VKININSYQRSAENLRSVKDSFESSIFRTKLLRGNPTGKITKRIETLLDNVRVLQQVHA
FT KLEIIAYSGGEKLNMDKKSVDELNEIVELQSKNSLTAERLARMIASNKNPAPISVNLFA
FT ESGGQMLGGLLVMVAAWFMDLVFWVSPRKQDDITIEGKGRAYNRDKRMGYDSYEEDEVR
FT NKINKKFKERSTRFSNDSKPETSSKYRNLKQEFVNFYDLKTDANVLQAVFTAMDGAVLL
FT QTEAPMADIDRVNRLLQEHFSDSDSQAVHEGLNTMVKCHLTMKDGRQFELDMEWHDPET
FT VAKLGGEVGFRMNRDELRQVGATRYINPKAQTSAATLEGMTMKPMSSFTIDSAKMVGFI
FT KTAKDTLNCILYGDWIIAPAHIQQGEGDITFIFQHTQFTTTTERLSSYGIRQFKGLDLV
FT VIRRPQQIRAVKKDMRASILDTPTEIQMLYLSTKGGKYQVSTSAVCFPHYNNRWGHVIS
FT TAEGMCGCIVFNPTTNHIVGIHVSYNDTRRRNEFQAFTSDVLTTINAPGHEIPFSPWVF
FT DWKFCGYTTKPRNLQSAPNTLERLNINATGFGFKLNAQEIKPAMLRSTESFSREFPDTQ
FT FKLIGEVKKGLIDKHTITGENPYFLEFLNTFKPYQWVQAFMDEYAPSILAYDAYFKDLK
FT KYDRPPHASVFCKDTLTKAKHKMIKILEEAGMGRTLVRTTEQVLLDMAWTTSGGPLYHG
FT KKIDIVQHLSDDELVQFSEACQQALITGTLDGVWNGSLKAELRSSQKIFERKTRVFTAA
FT PITSLIAMKYYVDDFNKQFYKTHLKAPHTVGINKFNRGWQNLYEKLNKPGWTHGSGDGS
FT RFDSSIDGFLFDVIKDIRKHFMDTEHHKQLDTIYEEIVNTKICLANGLVIQKNCGNNSG
FT QPSTVVDNTLALMTSFLYAYARLTVDDTFELMDENFVFVCNGDDNKFAMSPSFMAKFGC
FT DFSPFLSELGLTYEFDEATEDICENPYMSLTMVRTSFGIGFSLSIERIVAILQWSRAGG
FT VLHAYLSGIAALFESFNTPKLFNLVHTYLLWLVTEHEEELFSMMELKDMFMPLPTREQI
FT ALLHYVGTGPIVEETYLQSGKDEPDPIVPPVSDTDLTNLAAAPPANTRSRAVVPRGTSD
FT WNLPEPKMRMLGFKSKINIETLADVPEGYMNTFASVATETQRRKWEETTRGDFGITDDE
FT KWEKLLIAACIYFADNGTSPNFDEELTMEVNGGLNSIKEYPVRPFVVRAKKISTLRRIF
FT RCYSIETKLMFVKLRPVPQWAIKHGCLDEIVFDFMIPDQFTSRTALETLKQTKLAAIGV
FT GTSNSLLTSEQTNMRTTETRRRNDYDGHEALLR"
XX
SQ Sequence 7273 BP; 2060 A; 1907 C; 1604 G; 1702 T; 0 other;
AF536942 Length: 7273 September 9, 2003 10:36 Type: N Check: 8445 ..
1 aaaaataaaa caaaactaca acccaataca aacaacgaac aacaatcaac
51 gaattcaaaa ctcatcaaag catcatcgct cactagcgac aattcaaacg
101 aactcaacaa caaaccaccc ttcgaccaaa cgaactccaa ccatcaagat
151 ggaagagttc attcccgaag tgttctacca gaaccaggtt caaagtctca
201 agaaaattct taaatcctgg aaacgtggca cttccattta cgcgtatctt
251 gctcgcgagc aagaggtcct agccttcctt gtgctgagtc ctgcgcacat
301 tgcaaagttg aacaaactac tcactgagga gtctgcacga tgcgctctac
351 ttgcccagaa ctgtgaaacc atcgaggctc tagccgttgt gcgacaagcc
401 ctgcagggag tcacgttaca ctttggtgac aatggcatgg agaaaggctg
451 gctgcacatg atgaaagcac ttgacgcgtg tcttgatgaa agctttagcg
501 agaacgccgc tgcgctcaag aaaagcatcc aggcggttgg tcacaagctc
551 attgcggcaa aaaatcgcat cgaaagctgc gagcgatctg taaatcacct
601 tacaacgttt caatttgctc gcgaatatgg cttaagtacc acatacttcg
651 aaaaattgtc caatttcggt gggcatattc gaagttttgt gtggtccagc
701 gactcaggag aaatttccca aaggccaagg aaaagaaatc atcacatacg
751 acgcgcattt cggcattcac gagctactac tggggtgagt tttggtgcaa
801 ctgcatctgg ctcctctgtt ccctctggtc tccccgcacg ctggtgcttt
851 aattccgcag ttttcatttg gagtctatgt ggtgtcctaa atttatccat
901 ggttgttttg caattcactc ttaagcgtca ttttggtaaa ttctacttcc
951 gctatattat gtctggtgtt ttagctattt gtgccgtttg ctgtgtgcat
1001 cttaaaaatc gaaaagggcc tatacttcaa gcctctcaaa aagataaacg
1051 tttcatagga atattagcct tctgtatcac tgtcatatat atgtttgatg
1101 tggatcttgc cgactcgctg agtaacaacc tccataagat atcccgtctc
1151 gtgaaccttt tcttggatga caaccgcgga ttcgcaacac ctgctcttga
1201 caatctaacc gatttcacaa caatccttca aagtggaaca tcgagtgacg
1251 acctaaagat tgttcaggac acgttggccg ttgttttaca agtcgacgat
1301 gaggacgcaa ctcaagatga cgcaatatac gattccgacg ggctccagac
1351 tttcaagcaa tgggtctctc acaaccaact agccggaatg caactcgcac
1401 gtccactaca atacccgtgc tccaacacct atggcctaac tgcagacaat
1451 gtcgcggaac tagccactag catggcacag gaagcgaagc agtggtcgca
1501 agttgtcggc cacactggct ccgggaagtc cacacggcta ccaactgcat
1551 acgccaactg tctcaaaggt ttggctgggc gaaagaaaaa tgtccttgtt
1601 tgcgaaccca ctagagctgc aactgttaat gtgaccagcg gcatttcgca
1651 aaatttcggc aggcttgttt acggacgaca tgagggttgg agcaaccttg
1701 gcgacaagac aatacaagtc atgacatacg gttccgcact cgcagcatgg
1751 aaagtcgaca acaaattctt aagccagttt gacgcagtgt ttcttgacga
1801 atcccacctc ataaccacgc atgcccttgt tttcgaaagc atctgccagg
1851 aagccactaa cgttcgcaag ttctatgtgt cagcaacacc ccgcgatggc
1901 aagaaatgcc cagaagccgt acgcagatat gaaatcaaaa ccgtgaaatc
1951 cgagtgcagt agtatcgaca ctttcgttcg gagccaggag aaggaaaact
2001 cgctttatgt tctcaaacac gacaccgtac tcgtctttct tgctggtaag
2051 gctgagtgcg atagagcagc aagcaactgg aacaagctgt actcgaccaa
2101 catgtacgca tactccctga caggcgataa cttcacagtg gcatatgaga
2151 atatcgtcac acgcatgctc actgatcgta tcatcgtttt ctgcaccaac
2201 attctggaaa ccggtgtcac cctcaacgta gattgcgttg ttgactttgg
2251 attcactatg cgtcccgagc tcgatcttgt cgacaaatcg ctcaccttaa
2301 tgcgacgccg agtcactgag aacgagcgcg cacagcgcat tgggcgtgca
2351 ggaaggctca gaaccggaca tgcaatctgc attggcaatc ccgagacgcg
2401 ccacgaccta gttccacccg aaactctcta cgaggcagct cttcttagct
2451 tcgtgcatgg cgtgcaattc tacatcaatg agcatttcga gaatgcctgg
2501 attgaaggtg tcacaaagtc ccaagcctct gtaatgacgc aattcaaact
2551 ttctcccttc cttatgcgtg acattgttcg cgatgatggc gcaataccac
2601 tatcactcca caagatactc aaggattaca cacaccgcaa caccgatctg
2651 ataggaacaa aactctccgt catgtcgcat gtctataact catggcctct
2701 atatcgtaca gtgcaccaat ccatcttccg tggagattcc aatgttccac
2751 aagcgctcaa acacgcacgc gtccctttca acgtcagcac cgcccatgat
2801 ttcccatggg aaaatttcgc acaggcatgt ctcgaattcc agccacgtgt
2851 tcttcaggtc ttcagtgaca gcagcagcac ttcgcgcata atcaacctcc
2901 agatcggtaa gatgcacatc gttaattcca tggaagaagt caagataaac
2951 ataaacagct accagcgctc tgcagaaaac ctacgctcag tcaaagacag
3001 ctttgagagc tccatctttc gaacaaaact gctccgtgga aatccaactg
3051 ggaagataac taagcgcatt gagactcttc ttgacaacgt gcgagtgctg
3101 caacaggtgc acgcgaagtt agagatcatc gcatactcag gtggagagaa
3151 actcaacatg gacaagaaat cagtcgacga acttaatgag attgtcgaac
3201 tccagagcaa gaattcactc actgccgaga ggctagcacg catgattgca
3251 tctaacaaga accccgctcc aatttctgtt aacctgtttg ctgaaagtgg
3301 cggacaaatg ctcggaggtc tcctagttat ggttgccgcc tggttcatgg
3351 acctcgtttt ctgggtttcc ccaaggaaac aggatgacat caccattgaa
3401 ggcaaaggta gggcatacaa ccgtgacaag cgcatggggt atgattccta
3451 cgaggaggac gaagtccgca acaagattaa caagaagttc aaagaacgca
3501 gcacaagatt ctccaacgac tccaagccgg aaacaagctc aaagtaccgg
3551 aatctgaagc aagaattcgt gaacttctat gatcttaaga ctgatgctaa
3601 cgtactacaa gccgtgttca ccgcgatgga tggagccgtt cttcttcaaa
3651 cggaagctcc aatggcggac attgaccgtg ttaacagact actccaggaa
3701 catttttcgg atagcgacag ccaagctgta cacgaaggtc tcaacaccat
3751 ggttaagtgc cacttaacca tgaaagacgg gagacagttt gagctcgaca
3801 tggaatggca cgatcccgaa actgttgcta agcttggagg cgaagttggt
3851 ttcagaatga acagagacga gctacgccag gttggagcca cacggtacat
3901 caacccaaaa gcgcaaacat ctgcagcgac acttgagggc atgaccatga
3951 aacccatgag ttctttcact attgatagtg caaagatggt tggcttcatc
4001 aagaccgcga aagacacact caactgcatt ctgtatggcg attggatcat
4051 agctcctgca catatacagc agggcgaagg ggacataaca ttcatcttcc
4101 aacacacaca gttcacaacc acaaccgagc gcttgtctag ttacggaatt
4151 cgacaattca aaggtcttga ccttgttgtc attcgacgtc ctcagcagat
4201 acgcgcggtc aagaaggaca tgcgcgctag cattcttgac acacccactg
4251 aaatacagat gttgtactta tcaaccaaag gcggcaagta ccaagtgtcc
4301 acgtccgctg tgtgcttccc acattacaac aaccgatggg gacatgtcat
4351 ttcaacggct gagggcatgt gtggctgcat tgtgttcaac cccaccacga
4401 accatattgt ggggattcac gtctcctaca atgacacgcg aagaaggaat
4451 gagtttcaag ctttcacaag tgatgttctc acaacgatca atgcacctgg
4501 acacgagata ccatttagcc catgggtctt cgattggaag ttttgcgggt
4551 acacaacaaa accacgaaac ttgcagagcg caccaaacac gcttgaacga
4601 ctcaacatca acgccacagg ttttggtttc aaactcaacg cgcaggagat
4651 caaacctgcc atgcttcgct ccacagaatc attctccagg gagtttccgg
4701 acacacagtt taagctcatc ggagaggtga agaagggact cattgataaa
4751 cacacgatta caggagagaa cccttatttc cttgaattcc tgaacacatt
4801 caaaccatac caatgggtgc aagctttcat ggacgagtac gcaccctcca
4851 tccttgccta cgacgcgtac ttcaaggact tgaagaagta tgataggccg
4901 ccgcacgcaa gtgtgttctg taaggacaca ttgactaaag ccaaacacaa
4951 gatgattaaa attctcgaag aggcaggtat gggaaggacc ctagtacgaa
5001 ccaccgagca agtcttgctt gacatggcgt ggaccacctc tggtggaccc
5051 ctataccatg gcaagaagat cgacattgtg caacacttat ctgatgatga
5101 gcttgtgcaa ttcagtgaag cctgccaaca ggctctcatc actggaacgc
5151 tagatggagt ctggaacgga tcactcaaag ccgagctacg ctcttcgcag
5201 aaaatcttcg agcggaaaac ccgtgttttc actgccgccc ccataacaag
5251 cctaattgcg atgaaatact acgtggatga tttcaacaaa caattctaca
5301 aaactcatct caaagcacca cacacagttg gcatcaacaa gtttaaccgc
5351 ggatggcaga atctctatga gaagcttaac aaacctggat ggacgcatgg
5401 gagtggggac ggctccaggt tcgacagctc tattgacgga tttctcttcg
5451 atgttatcaa agacattcga aagcacttca tggacacaga acaccacaag
5501 cagcttgaca caatctacga agaaattgtt aacacgaaga tatgcctagc
5551 gaatggttta gtcatccaaa agaattgcgg aaacaatagc gggcagccca
5601 gcaccgttgt cgacaacaca ctcgcactca tgacttcttt tctttacgcg
5651 tacgcccgac taactgtaga tgacaccttc gaactcatgg acgaaaactt
5701 cgttttcgtc tgcaatggcg acgacaacaa gttcgccatg tcacccagct
5751 tcatggcaaa gttcggatgc gatttttccc cattcctttc tgagctaggg
5801 ctaacctacg agttcgacga agccaccgaa gacatttgtg aaaaccccta
5851 catgtctttg acgatggttc gaacctcgtt tggcatcggc ttctctctct
5901 ccatcgaacg catcgttgca atcttgcaat ggagccgcgc tggtggagtc
5951 ctgcatgcct atctctctgg cattgccgct ctcttcgaat ccttcaacac
6001 acccaaactc ttcaacctcg tgcacacata cctcctctgg ctcgttacgg
6051 agcacgagga ggaactcttt tcaatgatgg aactcaagga catgttcatg
6101 cctctgccca ctagggaaca gatagccttg ttgcactacg taggcactgg
6151 gcccatcgtg gaagaaacat atctgcaatc aggaaaagat gaaccagacc
6201 ccattgttcc tccagtttct gacactgatc tcacaaactt ggctgcggca
6251 ccacccgcca acacaaggtc gcgcgccgtc gtcccccgtg ggaccagtga
6301 ctggaatttg cccgaaccca agatgcgcat gctaggtttc aagtccaaaa
6351 tcaacatcga aacgctcgcc gatgtccccg aagggtacat gaacaccttt
6401 gcgtccgttg caactgaaac gcaacgtagg aaatgggaag agaccacgcg
6451 tggtgatttt ggtatcaccg acgacgagaa gtgggagaag ctgctcattg
6501 ctgcttgcat atatttcgca gacaatggca cttcaccaaa cttcgatgaa
6551 gagctcacta tggaagtcaa tggcggtctc aactccatca aagaatatcc
6601 cgtccgccct tttgttgtca gggctaaaaa gatctccaca ctgcgcagga
6651 tttttcgttg ttactccatt gagacgaaac taatgttcgt gaaactgagg
6701 cccgtgccgc aatgggccat aaagcacggg tgccttgatg aaatcgtctt
6751 cgatttcatg atcccagacc agtttacttc cagaactgca ctcgaaacac
6801 tgaagcaaac caagcttgcc gccattggtg ttggcacaag caattctctc
6851 ctcacctccg agcagacgaa catgagaacc actgaaaccc gaaggcgcaa
6901 cgactatgat ggtcacgagg cgcttctccg gtaggtatct catgcggttt
6951 cattttcttt tcagcagtgc atttaaatac gcttttaatt acatcaagcg
7001 tcaagagttg ttcccgcttg cagctaatcc ttatggggtg gcactttgtg
7051 ttatgcaatg gacaattcaa tgacgcaatc aaccatcatt ggttggtgac
7101 aacgcagcaa gttctttctt ttcacatcaa gcgacctgca catcgcaccg
7151 cttacagcta atcctacctg agggtggcac tctgtgttat gtaatggaat
7201 gtgcaatctc gcaaccaacc gtcattggtt gatggtgcgg ctaaaacccg
7251 cactcctgta taccggaaag gtt