Sequence of DPV Barley mild mosaic virus
Barley mild mosaic virus segment RNA2, complete sequence.
ACC No: AF536943
Dated: 2003-08-28 | Length: 3520 | CRC: -2140569406
!!NA_SEQUENCE 1.0
ID AF536943 standard; genomic RNA; VRL; 3520 BP.
XX
AC AF536943;
XX
SV AF536943.1
XX
DT 28-AUG-2003 (Rel. 77, Created)
DT 28-AUG-2003 (Rel. 77, Last updated, Version 1)
XX
DE Barley mild mosaic virus segment RNA2, complete sequence.
XX
KW .
XX
OS Barley mild mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-3520
RA Lee K., Choi M., Lee W.;
RT "Nucleotide sequence of barley mild mosaic virus RNA 2";
RL Unpublished.
XX
RN [2]
RP 1-3520
RA Lee K., Choi M., Lee W.;
RT ;
RL Submitted (09-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL Department of Agricultural Biology, Bioresources Science College of
RL Agriculture, Chonbuk National University, 664-14 1-ga, Deokjin-dong,
RL Chonju, Chonbuk 561-756, Korea
XX
FH Key Location/Qualifiers
FH
FT source 1. .3520
FT /db_xref="taxon:12466"
FT /mol_type="genomic RNA"
FT /organism="Barley mild mosaic virus"
FT /specific_host="barley cultivar baegdong"
FT /segment="RNA2"
FT CDS 142. .2826
FT /codon_start=1
FT /product="polyprotein"
FT /protein_id="AAQ10759.1"
FT /translation="MMMNSTIRQGWQQVLKRFSIPASGDRLIISNPTDQPIGLFGAFDT
FT SLQTLSQVGDDPEVLKQKIHIPMHLDIASALEASPRSFPWIFLTNSFCTFGGSIHAQSL
FT QTFATAEFKSGFCYMNLLIPLSFDIIDTHADSFRIFVEQLPDMLGAYPTLSMVLNVMLH
FT AATRFPEIVSSPVPTIAFDAESLQFHVTGKRGVPGMWNILKAGRVYVLLSLAADGVGCE
FT YMLYPVGAAPQYSFWKKSMDHFTSDRAVEFLAMQSLLASALEQDYTTHDALDALLAALQ
FT NAGYTNVVARERRFPNGHDPSTVWLNLSEAPISEKLTDLKRYLLVGHRSDDTADITHNV
FT HQYVFEVLKTMSVQFSKTTNAYNRARFEVNHKIIWNAEYGRGPQQNAELEALVLFLNRQ
FT SLEIENILHRTTSPVVVTDWQPDVPPAAPEVSQEEPTLATATPITEAPAHATPVEVVNL
FT PPARSYWAETLVGILTAILGTIFALLTRALIRAKKLRRKSTFPWVTLDSGDEDDDHSGG
FT GGGSPQTPGGQPPASPAHGTHQSRLSVQDIASDTSLLSVDLDEDTLSQYDETFQRIRRA
FT LFETSFADILQNSARWISTLEAMALADGNAPYTLLAQYLNGIEETYTNFRNTGHVSRTT
FT LSGFFALEDSLRAAGIAFGATTPTQTIHNQFAGSPARRWKTRFEQIACELGDASIKSLA
FT DLANIIDTERERSDLTQFDVLAASSISSLCRAVRIISDTTDPDAQLALVENATAMQNNI
FT NAILGTNVSIPFLSATRRLLITRRIQQAGAENRSGATPDTIQQLADAELAKIVSEANMF
FT NEMAASQRDIANATREATIREHVLSPVNALANVGMAAAFFRSGGMRSRALHPAMPTMPG
FT VSAATGRPMFQAFRGRGHRLNRR"
XX
SQ Sequence 3520 BP; 918 A; 1014 C; 774 G; 814 T; 0 other;
AF536943 Length: 3520 September 9, 2003 10:36 Type: N Check: 9293 ..
1 aaaaataaaa caaaactaca acccaataca aacaacaaac aacaatcaaa
51 caaacaaaca cacacctaac acacacaaca aaccacagtt cacagcttcg
101 aaacgcggac tcacccaccg cactctcaga attgaacata aatgatgatg
151 aactccacga ttcgccaagg atggcagcaa gtgctcaaac gcttttctat
201 cccagcatcc ggagataggc tcatcatttc caatcccacc gatcaaccca
251 taggtctttt cggagcattc gacacatcat tgcaaacact ctcgcaggtt
301 ggcgatgatc ccgaggtttt gaagcagaaa atccacatcc ccatgcacct
351 agacattgca tccgcgctcg aagccagccc ccggtccttc ccatggattt
401 tcctcacaaa ctccttctgc acttttggtg gttccataca cgcccagagt
451 ctccaaacct tcgcaactgc tgagttcaag agcgggttct gttacatgaa
501 cctgctgata ccgctcagtt ttgacatcat tgatacacac gctgattcct
551 ttcgcatctt tgttgaacag ctccccgaca tgctaggtgc ctacccaacg
601 ctcagcatgg tgctaaacgt catgttgcac gcagccacgc gcttcccgga
651 aattgtgagc tcccccgttc caaccatagc attcgatgcc gaatcactgc
701 agttccacgt aactggtaaa cggggcgttc ctggcatgtg gaacatactc
751 aaagccggcc gcgtgtatgt gcttctttcg ctcgcggcgg atggcgtagg
801 ttgtgagtac atgctgtatc ccgttggcgc tgcaccccaa tactccttct
851 ggaagaaatc tatggaccac ttcacatccg accgggccgt tgaatttcta
901 gccatgcaga gcttacttgc tagtgcgctt gaacaggatt acacaacaca
951 tgacgcactt gacgcattac tagcagctct acagaacgca ggctacacaa
1001 atgttgtcgc aagggaaaga agatttccaa atggccacga ccctagcact
1051 gtctggttga acctaagcga ggcccccatt tcggagaagc taactgatct
1101 taaacggtac ctcttggttg gtcacagaag cgacgacact gcggacataa
1151 cacacaacgt gcaccagtac gttttcgagg ttcttaaaac catgtctgtt
1201 cagttcagca agacaacgaa cgcttacaac cgcgcccgtt tcgaggttaa
1251 ccacaagatc atttggaatg cggagtatgg gcgcggtcct caacaaaacg
1301 ccgagcttga agctcttgtt ttgtttctta ataggcaatc gctggagatt
1351 gagaacattc tgcacagaac aaccagtccc gttgtcgtga cggactggca
1401 gcctgatgtt cctcctgcag cacccgaagt tagccaagaa gaacccacac
1451 ttgcaactgc aacaccaata actgaagcgc cagcacacgc aactcccgtt
1501 gaagttgtga acctgccacc agcacgctct tattgggctg aaacacttgt
1551 tggcatacta accgcgattc tagggaccat cttcgcctta ctcacccgag
1601 cgctcattcg tgcaaagaag ttgcgaagga agtccacctt cccctgggta
1651 acactggatt ctggagacga agatgacgac cattctggag gaggaggagg
1701 tagcccacaa acacctggcg ggcagccccc agcctcgcca gcacatggaa
1751 cgcaccaatc acgcctctct gtgcaagaca tagcatcgga caccagcctc
1801 ttaagtgtgg acctcgacga agacacgctc tcccaatacg acgaaacctt
1851 ccagaggatt cgccgtgcgc tctttgaaac cagttttgca gacatcctgc
1901 aaaactctgc tcgctggatt tccacgttgg aagcaatggc tttagcagac
1951 ggcaacgccc cttacacgct tctcgcgcaa tatctcaatg gaattgagga
2001 gacgtacacg aactttcgta acacggggca tgtttcgcgc acaacactct
2051 ctggcttctt cgctttagaa gacagcctgc gcgcggccgg catagccttt
2101 ggagccacaa caccaacgca aactatacat aaccagtttg ctggctcccc
2151 agcccgccgt tggaaaacac gcttcgaaca aatcgcatgc gaattgggcg
2201 acgctagcat taaatcgctc gcggatcttg cgaatattat cgacaccgag
2251 cgtgaaagaa gtgacttgac tcagtttgat gttcttgcag cctcttccat
2301 aagcagtctc tgtcgtgccg tccgcatcat cagtgacaca actgatccag
2351 acgcacaact agccctcgtt gagaacgcga cagccatgca gaacaacatt
2401 aacgccatcc tggggacgaa tgttagcata cctttcctca gtgcaacacg
2451 tcgcctgctc atcacgcggc gcatccagca ggctggtgca gaaaatcgtt
2501 ctggcgcaac acctgacacc atacagcagc tggctgatgc tgaacttgct
2551 aaaattgtta gcgaggctaa catgttcaac gagatggccg ctagtcagag
2601 ggacatcgct aatgccacac gagaggccac cattcgtgag catgtgctca
2651 gtcctgttaa tgccctggca aatgttggca tggctgctgc tttcttccga
2701 tctggtggaa tgcgctcaag ggctcttcac cccgcgatgc caacaatgcc
2751 cggtgtttct gctgccacgg ggcggccaat gttccaagcc ttcagaggcc
2801 gaggacatcg tctcaacaga cgataaaact ctgtgctttt gcacagcact
2851 gaacaagcga cacacgcttg ttgtgataat tgattccacg ctcagcgtgc
2901 cactgaataa gcgacacacg cttgttgtga taattaatta atttttgcgc
2951 agactctgtc tgtgttttct agagtgtgct gctctgcagc tgcattggag
3001 ggtttcacgg gaacgacatc atcaccccat ccacaaaccg cctgcattca
3051 catattgtgc cactttaaat actcatacgc ataggcaagt gcctttctgg
3101 cagagcatcc ctgagtgatg gccactcacg cgatcgcaat caactgactt
3151 aatcctcggt tttgcaatca aatagtgagt cccacctccg gatctgttcc
3201 cctggaactg caatcctcgt tatgttgtcg ctgattacta tcagctcgta
3251 aaccatgata tccacccaca attagctact cgtgtactaa cagtaccgga
3301 tacgcctatc ctgcacttaa gcctgcagga cgctaccagg tccgcctact
3351 gttaccattt gtgtagttcg ttgtggttcc acctcatatc taaattcagt
3401 acctgcatac aaaacgtcat gcatccctgt tcaacatgaa cgcgggtttg
3451 ggaagaagca agtcatcata gactgctggc attgttaggt tgacaatgtt
3501 tatgtacaca ggaacgtgat