Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Mart 1 polyprotein gene, partial cds.

ACC No: AF548493

Dated: 2003-10-24 | Length: 1056 | CRC: -1743854285

                !!NA_SEQUENCE 1.0
ID   AF548493   standard; genomic RNA; VRL; 1056 BP.
XX
AC   AF548493;
XX
SV   AF548493.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Mart 1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1056
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1056
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1056
FT                   /country="Martinique"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Mart 1"
FT                   /specific_host="Dioscorea Cayenensis-rotundata"
FT   CDS             <1. .912
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12303.1"
FT                   /translation="RRLYLGDDDSNTELYNRYLRALIDNYNHDESDIVVHQASKEQTFD
FT                   AGQFASKQSQPQGPASSSEGPGKDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKVLVNLE
FT                   HLVEYEPEQVDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSPN
FT                   INGNWYMIENGEQIEFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYGL
FT                   KRNLNDYSLARYAFDFFEITSKTPVRAREAHMQMKAAALRNTRTRLFGLDGSVSNNEEN
FT                   TERHTSDDVSKDMHSLLGVRNI"
FT   mat_peptide     <1. .111
FT                   /product="NIb"
FT   mat_peptide     112. .909
FT                   /product="CP"
FT   3'UTR           913. .1051
XX
SQ   Sequence 1056 BP; 346 A; 199 C; 250 G; 261 T; 0 other;

AF548493  Length: 1056  November 11, 2003 09:09  Type: N  Check: 9354  ..

       1  cgaagactgt atctaggaga tgatgacagt aatacagagt tgtacaacag
      51  gtatctgaga gcgctcatag ataactacaa tcatgatgaa tctgatatcg
     101  ttgtccacca agcaagtaag gagcaaacat ttgatgccgg acagttcgca
     151  agcaagcaat cacaaccgca aggaccagca agtagttctg aaggaccagg
     201  aaaggacgtc aatgttggaa caaaggggac attcagcatt cctcgcatca
     251  aagcaccaat gagcaaattg acgttaccaa aactgaaagg aaaagtttta
     301  gtaaatctag aacatttggt cgagtacgaa ccggagcaag tcgacatttc
     351  aaacaagaga gcttctcagg agcagcttgg tcaatgggtg gaggcagtca
     401  aaacttcata tgatgtggat gatgaacaac tgaaaattat tttgaatgga
     451  ttcatggtgt ggtgcattga aaatggaact tctccaaaca ttaatgggaa
     501  ttggtatatg attgagaatg gagaacagat tgagtttcct ttgaaaccaa
     551  ttgttgagaa cgcaaagcca acacttcgac agatcatggc acattttagt
     601  gatttggctg aagcgtatat tgagaagcgc aacgcgaaga aagcgtacat
     651  gccaggttat ggattaaagc ggaacctcaa cgactactca ctagcacgct
     701  atgcttttga cttctttgag attacgtcga agactccagt acgcgcacgt
     751  gaggcacaca tgcaaatgaa agcagcagct ctacggaaca ccagaactcg
     801  tcttttcggt ttagatggtt ctgtcagcaa caatgaggaa aacacggagc
     851  ggcacacaag tgatgacgtg agcaaagaca tgcactctct tcttggagtg
     901  cgcaatatct agatatttat ataagtaagg tttgctaaac ttatataagt
     951  attgcatagt attagtgtgg ttcgtccacc ttaagtaagt actatgttca
    1001  ctctactggt gattcagagt ggctgtgcca tctataattt ccaatagagg
    1051  ggcgac