Sequence of DPV Papaya ringspot virus

Papaya ringspot virus CP gene, isolate Chiapas (ChT-11), partial

ACC No: AJ012650

Dated: 2000-06-03 | Length: 924 | CRC: 1454890843

                !!NA_SEQUENCE 1.0
ID   PRI012650  standard; RNA; VRL; 924 BP.
XX
AC   AJ012650;
XX
SV   AJ012650.1
XX
DT   13-NOV-1998 (Rel. 57, Created)
DT   03-JUN-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Papaya ringspot virus CP gene, isolate Chiapas (ChT-11), partial
XX
KW   coat protein; cp gene.
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Silva-Rosales L.;
RT   ;
RL   Submitted (05-NOV-1998) to the EMBL/GenBank/DDBJ databases.
RL   Silva-Rosales L., Ingenieria Genetica, Cinvestav-IPN, Apdo. Postal 629,
RL   Irapuato, Guanajuato, 36500, MEXICO.
XX
RN   [2]
RA   Becerra-Leor E.N., Ruiz-Castro B.S., Noa-Carrazana J.C., Teliz-Ortiz D.,
RA   Silva-Rosales L.;
RT   "Coat protein sequence comparisons of three mexican isolates of papaya
RT   ringspot virus with other geographical isolates reveal a close relationship
RT   to American and Australian isolates";
RL   Arch. Virol. 145:835-843(2000).
XX
DR   SPTREMBL; Q9YPX5; Q9YPX5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="Chiapas (ChT-11)"
FT   CDS             <1. .858
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9YPX5"
FT                   /gene="CP"
FT                   /function="coat protein"
FT                   /protein_id="CAA10099.1"
FT                   /translation="SKNEAVDAGLNEKLKEKEKQKEKEKQKEKERGDASDGNDVSTSTK
FT                   TGERDRDVNVGTNGTFTVPKIKSFTDKMILPKIKGKTVLNLNHLLQYNPRQIDISNTRA
FT                   TQSQFEKWYEGVRSDYGLNDNEMQVMLNGLMVWCVKNGTSPDISGVWVMMDGETQVDYP
FT                   IKPLVEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRNSNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 924 BP; 310 A; 162 C; 223 G; 229 T; 0 other;

AJ012650  Length: 924  December 21, 2001 15:35  Type: N  Check: 8576  ..

       1  tccaagaatg aagctgtgga tgctggtttg aatgagaagc tcaaagagaa
      51  agaaaaacag aaagaaaaag aaaaacaaaa agagaaagaa agaggcgatg
     101  ctagtgacgg aaatgatgtg tcgactagca caaaaactgg agagagggat
     151  agagatgtca acgttgggac caatggaact ttcactgttc caaaaattaa
     201  atcatttact gataagatga ttctaccaaa aattaagggg aagactgtcc
     251  ttaatttaaa tcatcttctc cagtataatc cgcgacaaat cgacatctct
     301  aacactcgtg ccactcagtc acaatttgag aagtggtatg agggagtgag
     351  gagtgattat ggccttaatg ataatgaaat gcaagtgatg ctaaatggtt
     401  tgatggtttg gtgtgtcaag aatggtacat ctccggacat atctggtgtc
     451  tgggttatga tggatgggga aactcaagtt gattatccca tcaagccttt
     501  agttgagcat gctactccgt catttaggca aattatggct cactttagta
     551  acgcggcaga agcatatatt gcgaagagaa atgctactga gaggtacatg
     601  ccgcgatatg gaatcaaaag aaatttgact gacattagcc ttgctagata
     651  cgctttcgat ttttatgagg tgaattcaaa aacacctgat agagctcgcg
     701  aagctcacat gcagatgaaa gctgcagcgc tgcgaaattc taatcgcaga
     751  atgtttggta tggatggcag tgttagtaac aaggaagaaa acacggagag
     801  acacacagtg gaagatgtca atagagacat gcactctctc ctgggtatgc
     851  gcaactaaat acctgcgctt ggatccttgc tgcagtcatc cacagcttca
     901  ttctaggacc atgaagccga attc