Sequence of DPV Poinsettia mosaic virus
Poinsettia mosaic virus complete genome, genomic RNA
ACC No: AJ271595
Dated: 2005-04-15 | Length: 6099 | CRC: 1364172518
!!NA_SEQUENCE 1.0
ID PMO271595 standard; genomic RNA; VRL; 6099 BP.
XX
AC AJ271595;
XX
SV AJ271595.1
XX
DT 28-JAN-2000 (Rel. 62, Created)
DT 15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Poinsettia mosaic virus complete genome, genomic RNA
XX
KW coat protein; complete genome; replicase-associated protein.
XX
OS Poinsettia mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tymoviridae.
XX
RN [1]
RP 1-6099
RA Bradel B.G.;
RT ;
RL Submitted (25-JAN-2000) to the EMBL/GenBank/DDBJ databases.
RL Bradel B.G., Dept. of molecular biology and virology of plants, Biological
RL Institute, University of Stuttgart, Pfaffenwaldring 57, 70550 Stuttgart,
RL GERMANY.
XX
RN [2]
RX DOI; 10.1006/viro.2000.0335.
RX MEDLINE; 20319114.
RX PUBMED; 10860883.
RA Bradel B.G., Preil W., Jeske H.;
RT "Sequence analysis and genome organisation of poinsettia mosaic virus
RT (PnMV) reveal closer relationship to marafiviruses than to tymoviruses";
RL Virology 271(2):289-297(2000).
XX
FH Key Location/Qualifiers
FH
FT source 1. .6099
FT /db_xref="taxon:113553"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Poinsettia mosaic virus"
FT CDS 84. .6047
FT /db_xref="GOA:Q9IW08"
FT /db_xref="HSSP:1E57"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR001788"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="InterPro:IPR008043"
FT /db_xref="UniProt/TrEMBL:Q9IW08"
FT /product="replicase-associated protein"
FT /protein_id="CAB70969.1"
FT /translation="MAFQDAFNNLSSTVHRDTVAAPLLESIAQPLRDSLELYPWAINAE
FT KLDLLKKFGISVSGLGHQAHPHPFHKIIETHLLFQHWSHNCREDSTVLFMKPEKFQKLA
FT SFNPHFKHLLNYRLHAKDTTRFPETACSLPTTSTVFMHDALTYYKPSQIMDLFLRIPNL
FT NSLYASVVVPAESSFTDHSLYPEVYQYKTIRSHLHYVPESNHSSAYNQPADALLWLELS
FT TIQGPSFSLTVTRLDSWGPCHSLLIQRGIPPAHVVNDFVSFDVPAAVLLPEATSIRQPT
FT RHRLVPQSVYNALFTYTRAVRTLRISDPVGFVRTQSNKPEHAWVTSSAWDNLQHFSLLT
FT ASNRPSNSYSWNGSLWQRFISRLQTVAAELKSSAIFTSSITTFLFSLLFQYFRRKSAAS
FT RSLPSNLGFRSLDEHVKLHEGLLRAGFSYTHTSQTRQGPRDFYHRAAERFKFMSALVRS
FT ISLSLPLLAFAIYSKCTQPMPPQSLHDSYHNYHHPSKWVLGWSRRLTVVTPEAFLPFEP
FT VPIPADQSPPQWTPAPLQSLSISPQMRNSSGAGSTASFTATDITITIMASVFSPATPTP
FT LKGCLSSAPITCLISVEQRTLANTKPLILMTKRRRRSRILAPSRAPLRTQGCACSARGA
FT LKVLQPATAKKADPAPPKTRRINTYSLMGADQVYPSMSMVTSSQSPTRSCSRKSASSWS
FT IHRLWAVRLRTLYPANYIGTSADFLARLRNGPPSRVPIPVNQSCLLVAISKATSISLEE
FT LWKTLAALLPDSLLLPEDITTRGLSTDHFVVLASAHSLKCIFISGALELELGLHNAHHS
FT FTIRHTSSANQLPHFELVADGTRALRGAASDTKELNRAALGFKFKNAFLPFRKVHVYTT
FT EPDRAKNLISNMKNGFDGVLANIDPNHPHEARDRLLALDGSIEVHAPRKVSLIHLAGFP
FT GCGKTKPIQALLKTSLFADYKVAVPTVELRAEWKADLALKTGQAWRLSTWESSLLKTAS
FT ILVIDEVYKMPRGYVDLAVAADPTVRFVILLGDPLQGEYHSSHPESQNKRLSSEIHRLL
FT KYIDCYCLWSHRIPQCVARCFGVESSNEHEGYVGFSSFIAPQDITLACSQSSAKTLRDA
FT GYPATTVSSSQGSTYRTPINLLLDRNSRRLSSAVSLVAATRSTMAINMTGDRDVLQQGP
FT HNNPVFSALYNANLISLHSLFPTLFAKLPIIRTAITSRRGMLTGGNTSGEDDVIIDSRR
FT PGPLNAPEVDDTFLPTWRRPLHRNLASAVHSNCPAQSTHVTPAAITAVYPGESFENLAA
FT HFLPAHDPEIKEILHRGEFSAQFPILLNQDFSLSAQSSTLIAAKHDSKRDPTLLVASIT
FT KRLCFRPSDSSYQLSSKDQILGLTLYHSWCRAYNRHPQAVVPFDELLFAECININEFAQ
FT SSNKTKSTIIANASRSDPDWRITAVKIFSKTQHKINEASIFGSWKACQTLALMHDYVVL
FT FLGPVKIYQRIFDSQERPANVYYHAGHSPLEMSEWAQKHLQSGISHTNDYTAFDQSQHG
FT EAVVFEMAKMRRLSIPESLINLHSYLKRNVDTQFGPLTCMRLTGEPGTYDDNTDYNLAV
FT IYSKYLVLDHPIMVSGDDSVIGGNPTVSRNWPAIEKLLALRFKTESTKHPLFCGYYVGP
FT AGAIRSPITLFAKIMSAVDDLSIDDKLASYLSEFAIGHSLGHDFWDLLPIDQVPYQSAV
FT YDFFCRHASREQKQILNIGEVPDTVLSSIASHLRFASRALYCLLPSSVRRALTSKKTVT
FT DAFEDPDVSHMQGELLQNFQESNLTKLRGADMSDQVVKQLESNHVDSTPSLIPRPPFQG
FT GSRTVPFQTVAMDVVAAGGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQS
FT PITLDLVWSTNNVIFTDLQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSY
FT VDTPKLTLNASDPTGSGSTATTVATVLVSGKLMSPTHWPHPHPSSRTLIQQCFG"
FT CDS 5445. .6047
FT /db_xref="GOA:Q9IW07"
FT /db_xref="HSSP:1E57"
FT /db_xref="InterPro:IPR000574"
FT /db_xref="UniProt/TrEMBL:Q9IW07"
FT /note="putative start site from sgRNA"
FT /product="coat protein"
FT /protein_id="CAB70970.1"
FT /translation="MSDQVVKQLESNHVDSTPSLIPRPPFQGGSRTVPFQTVAMDVVAA
FT GGNATFNLAGHVSLSEITAPYRKARLAELKAIVCPTAASFQSPITLDLVWSTNNVIFTD
FT LQILQVYGGTRFAIGGPLLSHTYELRADLSYLNPVIKDSVSYVDTPKLTLNASDPTGSG
FT STATTVATVLVSGKLMSPTHWPHPHPSSRTLIQQCFG"
XX
SQ Sequence 6099 BP; 1304 A; 2103 C; 1315 G; 1377 T; 0 other;
AJ271595 Length: 6099 April 19, 2005 08:52 Type: N Check: 2943 ..
1 ggaaatacac atctccagtc agctccttta cgcaactgac ttttatttat
51 ccatcatctg tttgtttgcc cccggtatat cccatggcat tccaagacgc
101 tttcaacaac ctatccagca ccgtccaccg cgacacggtt gccgcacctc
151 tcttagagag cattgcccaa cctctccgcg actctcttga attatatccc
201 tgggcgatca acgccgagaa acttgacctg ctgaagaaat ttggcatttc
251 tgtctccggc ctgggtcatc aagcccaccc tcatccgttc cacaagatca
301 tcgaaacaca tctccttttc caacattgga gccacaactg tcgagaggac
351 tctacagtgc ttttcatgaa gcccgaaaaa ttccaaaaac tcgcctcttt
401 caaccctcac ttcaagcatc ttctcaacta ccgccttcac gccaaggaca
451 caacccgctt tccagaaacc gcgtgcagtc tccccaccac ttccaccgtg
501 ttcatgcatg acgccttgac gtactacaaa ccttcccaga tcatggatct
551 gttcctccgc attccaaacc tcaacagcct ctacgcttcc gtggtggttc
601 ccgcggagag ctcattcacc gaccattcct tataccccga ggtctaccag
651 tataagacta tcaggagcca tctccactac gtccctgagt ccaatcactc
701 ctcggcttac aatcaacctg ccgacgccct tctctggctc gagctttcga
751 ccatccaggg gccctccttc tccctcaccg tcaccaggct cgactcttgg
801 ggcccgtgtc actcgctcct gatccaacgc ggaataccac cagcccacgt
851 tgtcaatgac ttcgtcagct tcgacgtgcc agccgccgtt cttctccccg
901 aggccaccag cattcgtcaa cccacccgtc atcgcctagt gcctcaatct
951 gtgtacaacg ctctgtttac ttacactcga gccgttcgga ctctgcgcat
1001 ctccgatcca gtcggctttg ttcgcacaca gtccaacaag ccagagcacg
1051 cctgggtcac gtcctccgcc tgggacaatc tccagcactt ttctctcctc
1101 actgcctcta accgcccttc caactcctat tcctggaatg gcagcctctg
1151 gcagcgcttc atctctcgcc tgcaaacagt ggccgctgag ttgaaatctt
1201 cagccatctt cacttcctcc atcaccacct tcctcttctc tctccttttc
1251 cagtacttcc gtcggaaatc tgctgcctcc aggtctttgc ctagcaacct
1301 cggtttccgg agtctggacg agcacgtcaa gctccatgaa ggcctcctcc
1351 gggctggttt tagttataca cacacttccc aaacccgcca agggcctcga
1401 gatttctacc atagggccgc tgagcgattc aaattcatgt ccgccctcgt
1451 tcgttccatc tccctctctc tccccctgct tgcgttcgcc atctattcca
1501 agtgcacgca gcccatgccc cctcagagcc ttcacgattc ctaccacaat
1551 taccatcatc caagcaagtg ggtccttgga tggagtcgcc ggctcaccgt
1601 ggtcactccc gaggctttcc tgcctttcga acctgttcca atccctgcgg
1651 accaatcgcc gccacaatgg accccggccc ccctccagag cctgtcgatc
1701 tcgcctcaga tgagaaactc ctctggtgcc ggcagcacgg cgtcgttcac
1751 ggccaccgac atcaccataa caatcatggc ctccgtgttt tcccctgcca
1801 cacctacacc gctgaaggga tgtctatcat ctgcaccgat tacttgcctg
1851 atttcagtgg aacagagaac cctggccaac accaagccgc tcatcctgat
1901 gaccaagagg cgcaggcgga gccgcatcct tgccccctct cgcgcccctc
1951 tcagaaccca aggctgcgcc tgctcagccc gcggagcctt gaaagtcctt
2001 cagcccgcca ccgccaagaa ggccgatcca gcacccccaa aaacccgacg
2051 tattaacacc tactctctga tgggggccga ccaagtgtac ccgtcgatga
2101 gcatggtgac ctcctcccaa tctcccacga ggagctgttc tcggaaatca
2151 gccagctcat ggtcgatcca ccgcctatgg gcggtcagac ttcgcacact
2201 ctaccccgcg aactatatag gaacctccgc tgacttcctc gctcgcctcc
2251 gcaacggccc cccaagccgt gtcccaatcc cagtgaacca gagttgcctc
2301 ttagtggcaa tcagcaaagc cacctccatc tcgctcgaag agttgtggaa
2351 gaccctcgct gccctcctgc ccgattctct cctgttgcct gaggacataa
2401 cgacccgcgg cctctccacg gaccacttcg tagtcttggc ttccgcccac
2451 tctttgaagt gcattttcat ctccggggcg ctcgagctcg agttaggcct
2501 ccacaacgca caccactcct tcacaatcag gcacacaagc tcggctaatc
2551 aactgccaca cttcgagctc gtcgcggatg ggacccgggc ccttcgaggc
2601 gccgccagcg atacgaagga attgaaccgg gccgccctgg gtttcaaatt
2651 caagaacgcc ttcctcccgt ttcgcaaagt ccatgtctac accacggaac
2701 ccgatcgcgc caagaatctc atctcaaaca tgaagaatgg cttcgatggt
2751 gtcctcgcca acattgaccc gaaccacccg catgaagccc gtgaccgcct
2801 cctcgccctt gacggcagta ttgaagtgca cgcccccaga aaggtaagtc
2851 tgattcacct agccgggttt ccaggctgcg gaaagaccaa gcccatccag
2901 gcgctcctca agacgagcct gtttgcggac tacaaagtgg cagtgcccac
2951 cgtggagtta cgcgccgagt ggaaagctga tctggcgctc aaaaccggcc
3001 aggcttggag actctccact tgggagtcat ccttgctcaa gaccgcctcc
3051 attcttgtta ttgatgaggt gtacaaaatg ccccgcggtt acgtggattt
3101 ggcggtggca gctgatccta ccgtccgttt tgtcattctt ttgggtgacc
3151 cccttcaagg cgagtatcac agctcccatc cggaatccca gaacaagcgg
3201 ctctcctcgg agatccacag gctgctcaag tacatcgact gctattgcct
3251 ctggtctcac cgaatccctc aatgcgtcgc ccgctgtttc ggggttgaga
3301 gctcaaacga gcacgaaggt tacgtgggct tcagctcctt tatcgcaccc
3351 caggacatca ccctcgcttg ctcgcagagc tcagccaaga ccttgcgcga
3401 cgccggatac cctgccacca ccgtcagcag ctctcaaggt tccacttacc
3451 gcaccccaat caatcttctc ctcgacagaa acagtcgcag acttagcagc
3501 gccgtctcac tggtcgccgc cactcgttct accatggcca taaacatgac
3551 gggcgatcgg gatgttctgc aacagggccc acacaacaac ccggtgttct
3601 ctgcgcttta taacgccaat ctgatatccc tgcacagcct gttcccaacg
3651 cttttcgcaa agttgccgat catacgcacc gcgatcacca gtcgtagggg
3701 catgctgacc ggtggcaaca cctctggtga ggacgacgtt atcattgatt
3751 caagacgtcc gggcccgctg aatgctccag aggtcgacga tactttcctc
3801 ccgacttggc gacgccctct tcaccggaat cttgcctctg ctgttcacag
3851 caattgcccg gcccaatcca ctcacgtcac tccggccgct atcactgcgg
3901 tttatcctgg tgagtccttt gaaaatctcg cagcacattt cctccccgct
3951 cacgaccccg aaattaagga gatcttgcac cgcggcgagt tcagcgcgca
4001 gttcccgatt ctcctgaatc aggatttctc tctctccgcg cagtcttcca
4051 cgttgattgc ggctaagcat gactccaagc gcgacccgac gctgctcgtc
4101 gcctccatta ccaagcgcct ctgtttccgc ccgagcgatt cttcgtacca
4151 gctctcctcc aaggaccaaa ttctgggctt gaccctctac cacagttggt
4201 gccgagctta caaccgccac ccgcaggcag tcgttccatt cgatgagttg
4251 ctgtttgcgg agtgcatcaa cattaatgag ttcgcgcagt cctcgaacaa
4301 gaccaagagc acgatcatag cgaacgccag ccgatcggac cctgattggc
4351 gcatcacagc cgtcaagatt ttcagtaaaa cgcagcacaa aatcaatgaa
4401 gcctccatct ttggatcctg gaaggcttgt cagacgctgg ctctcatgca
4451 tgattatgtc gttcttttcc tgggtccggt caagatatat cagcgcatct
4501 ttgactccca agagcgacca gcgaacgtgt attaccatgc tggccactcc
4551 cctcttgaga tgtccgagtg ggcccaaaag cacctccaat caggaatctc
4601 tcacactaat gactacacag cctttgacca aagccagcat ggcgaggcgg
4651 tcgtcttcga gatggccaag atgcgccgct tgagcatccc cgagagcctc
4701 atcaaccttc attcgtatct caagcgtaat gttgacaccc agttcgggcc
4751 tctaacgtgc atgaggctca ccggcgaacc aggcacctac gacgacaaca
4801 cagactacaa cctcgcggtc atttacagca agtatctggt gctcgaccat
4851 ccaatcatgg tgtctggaga tgacagtgtg attggcggaa acccaacggt
4901 gtctcggaac tggcctgcca tcgaaaagct gcttgctctt cgcttcaaaa
4951 cagaaagcac caaacatccc ctgttctgcg gatactatgt aggaccagcc
5001 ggtgccatca ggtctccaat cacccttttc gcgaagatca tgagtgccgt
5051 cgacgatctc tcgatagacg acaaattggc aagttacctg tctgagttcg
5101 cgatcgggca ctctctcggg cacgactttt gggatcttct gccaattgat
5151 caagtccctt accaatccgc ggtgtatgat ttcttctgcc ggcatgcctc
5201 gcgcgaacag aagcagatcc tcaacatcgg cgaagtgcct gacacagttc
5251 tatcaagcat agctagtcat ctcaggtttg ccagccgagc cctgtattgt
5301 ctcttgccgt cctcagttcg ccgggctctc acatccaaga agacagtcac
5351 cgacgctttt gaagatcctg atgtctcgca catgcagggt gaattgcttc
5401 agaacttcca agaatctaac ctaaccaagc tacgaggtgc agacatgtca
5451 gaccaagtcg tcaaacagct cgaatccaac cacgtcgact ccactccatc
5501 tctcatccca cgcccccctt tccaaggtgg cagtcgcaca gtgcctttcc
5551 agactgtcgc aatggacgtc gtcgctgccg gcggcaacgc aactttcaac
5601 ctagcgggcc acgtctcgct ttctgagatc actgcaccgt accgcaaggc
5651 gcgtttggcg gaactcaaag ccatcgtctg ccccaccgct gcgtccttcc
5701 aatccccgat cactctcgac ctcgtctgga gcaccaacaa tgtcatattc
5751 accgacctcc agatacttca ggtctacggg ggcacccgct ttgctattgg
5801 cgggcccctc ctcagccaca cgtatgagct ccgcgctgac ctcagctacc
5851 tcaatcctgt catcaaggac tccgtctcat acgtagacac cccgaagctc
5901 actctcaacg cctctgaccc aactgggtct ggctcaaccg ccaccactgt
5951 cgccaccgtg ctggtgagcg gcaagctgat gtctccgacg cattggccac
6001 acccacaccc ctcgagtagg acccttattc agcaatgttt tgggtagtgg
6051 agccctctag cctccacctt ttcctttcct ctggcaatgg cgcctaaat